Single nucleotide variant rs3874545

Genomic position: 16:

Allele info and frequencies

Click here to go to dbSNP for more information.

This SNP has no significant association with diseases nor in high LD with index SNPs.

Click here to find this SNP in GTEx database.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000196436 Hippocampus trans-eQTL 4387234 0.00000000258314 0.687101 Display eQTL plot
From Hippocampus trans-eQTL 4387234 Pvalue: 0.00000000258314 Beta: 0.687101 Display eQTL plot
ENSG00000196436 Orbitofrontal Cortex trans-eQTL 4387234 0.00000000112555 0.698047 Display eQTL plot
From Orbitofrontal Cortex trans-eQTL 4387234 Pvalue: 0.00000000112555 Beta: 0.698047 Display eQTL plot
ENSG00000196436 Prefrontal Cortex trans-eQTL 4387234 0.0000000000377608 0.742617 Display eQTL plot
From Prefrontal Cortex trans-eQTL 4387234 Pvalue: 0.0000000000377608 Beta: 0.742617 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000429990 Cerebellum trans-eQTL 4387234 0.000000000257432 0.716354 Display eQTL plot
From Cerebellum trans-eQTL 4387234 Pvalue: 0.000000000257432 Beta: 0.716354 Display eQTL plot
ENST00000429990 Hippocampus trans-eQTL 4387234 0.000000000590603 0.706221 Display eQTL plot
From Hippocampus trans-eQTL 4387234 Pvalue: 0.000000000590603 Beta: 0.706221 Display eQTL plot
ENST00000429990 Orbitofrontal Cortex trans-eQTL 4387234 0.000000000151981 0.722567 Display eQTL plot
From Orbitofrontal Cortex trans-eQTL 4387234 Pvalue: 0.000000000151981 Beta: 0.722567 Display eQTL plot
ENST00000429990 Prefrontal Cortex trans-eQTL 4387234 0.000000000305363 0.718748 Display eQTL plot
From Prefrontal Cortex trans-eQTL 4387234 Pvalue: 0.000000000305363 Beta: 0.718748 Display eQTL plot

This SNP has no significant association with any pathology marker.