Single nucleotide variant rs548681847

Genomic position: 16:

Allele info and frequencies

Click here to go to dbSNP for more information.

This SNP has no significant association with diseases nor in high LD with index SNPs.

Click here to find this SNP in GTEx database.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000244257 Cerebellum cis-eQTL -43427 0.000000276915 -1.17122 Display eQTL plot
From Cerebellum cis-eQTL Distance: -43427 Pvalue: 0.000000276915 Beta: -1.17122 Display eQTL plot
ENSG00000227827 Cerebellum cis-eQTL -89310 0.0000000277176 1.24316 Display eQTL plot
From Cerebellum cis-eQTL Distance: -89310 Pvalue: 0.0000000277176 Beta: 1.24316 Display eQTL plot
ENSG00000285628 Cerebellum trans-eQTL 2051094 0.00000000677347 0.673775 Display eQTL plot
From Cerebellum trans-eQTL 2051094 Pvalue: 0.00000000677347 Beta: 0.673775 Display eQTL plot
ENSG00000254681 Cerebellum trans-eQTL 2107607 0.00000000059802 0.706066 Display eQTL plot
From Cerebellum trans-eQTL 2107607 Pvalue: 0.00000000059802 Beta: 0.706066 Display eQTL plot
ENSG00000244257 Orbitofrontal Cortex cis-eQTL -43427 0.0000000145211 -1.2617 Display eQTL plot
From Orbitofrontal Cortex cis-eQTL Distance: -43427 Pvalue: 0.0000000145211 Beta: -1.2617 Display eQTL plot
ENSG00000244257 Prefrontal Cortex cis-eQTL -43427 0.00000000273262 -1.30965 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -43427 Pvalue: 0.00000000273262 Beta: -1.30965 Display eQTL plot
ENSG00000254681 Prefrontal Cortex trans-eQTL 2107607 0.00000000787984 0.676073 Display eQTL plot
From Prefrontal Cortex trans-eQTL 2107607 Pvalue: 0.00000000787984 Beta: 0.676073 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000574894 Cerebellum cis-eQTL -6927 0.0000000305017 1.24035 Display eQTL plot
From Cerebellum cis-eQTL Distance: -6927 Pvalue: 0.0000000305017 Beta: 1.24035 Display eQTL plot
ENST00000458669 Cerebellum cis-eQTL -43427 0.0000000218194 -1.2501 Display eQTL plot
From Cerebellum cis-eQTL Distance: -43427 Pvalue: 0.0000000218194 Beta: -1.2501 Display eQTL plot
ENST00000532739 Cerebellum cis-eQTL -89310 0.0000000410443 1.23156 Display eQTL plot
From Cerebellum cis-eQTL Distance: -89310 Pvalue: 0.0000000410443 Beta: 1.23156 Display eQTL plot
ENST00000648391 Cerebellum trans-eQTL 2051094 0.000000000167163 0.721456 Display eQTL plot
From Cerebellum trans-eQTL 2051094 Pvalue: 0.000000000167163 Beta: 0.721456 Display eQTL plot
ENST00000532415 Cerebellum trans-eQTL 2107607 0.00000000152835 0.694072 Display eQTL plot
From Cerebellum trans-eQTL 2107607 Pvalue: 0.00000000152835 Beta: 0.694072 Display eQTL plot
ENST00000538166 Cerebellum trans-eQTL 2116557 0.0000000176212 0.659846 Display eQTL plot
From Cerebellum trans-eQTL 2116557 Pvalue: 0.0000000176212 Beta: 0.659846 Display eQTL plot
ENST00000458669 Prefrontal Cortex cis-eQTL -43427 0.000000000193173 -1.37297 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -43427 Pvalue: 0.000000000193173 Beta: -1.37297 Display eQTL plot
ENST00000532415 Prefrontal Cortex trans-eQTL 2107607 0.000000000229929 0.722138 Display eQTL plot
From Prefrontal Cortex trans-eQTL 2107607 Pvalue: 0.000000000229929 Beta: 0.722138 Display eQTL plot
ENST00000538166 Prefrontal Cortex trans-eQTL 2116557 0.0000000000781193 0.734599 Display eQTL plot
From Prefrontal Cortex trans-eQTL 2116557 Pvalue: 0.0000000000781193 Beta: 0.734599 Display eQTL plot

This SNP has no significant association with any pathology marker.