Single nucleotide variant rs1000215

Genomic position: 7:

Allele info and frequencies

Click here to go to dbSNP for more information.

This SNP has no significant association with diseases nor in high LD with index SNPs.

Click here to find this SNP in GTEx database.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000242294 Cerebellum cis-eQTL 55020 0.0000000149162 1.24461 Display eQTL plot
From Cerebellum cis-eQTL Distance: 55020 Pvalue: 0.0000000149162 Beta: 1.24461 Display eQTL plot
ENSG00000121716 Cerebellum cis-eQTL 39187 0.00000000101797 1.31415 Display eQTL plot
From Cerebellum cis-eQTL Distance: 39187 Pvalue: 0.00000000101797 Beta: 1.31415 Display eQTL plot
ENSG00000085514 Cerebellum cis-eQTL 6824 0.0000000258518 1.22905 Display eQTL plot
From Cerebellum cis-eQTL Distance: 6824 Pvalue: 0.0000000258518 Beta: 1.22905 Display eQTL plot
ENSG00000121716 Hippocampus cis-eQTL 39187 0.00000000183226 1.29977 Display eQTL plot
From Hippocampus cis-eQTL Distance: 39187 Pvalue: 0.00000000183226 Beta: 1.29977 Display eQTL plot
ENSG00000242294 Orbitofrontal Cortex cis-eQTL 55020 0.00000000518678 1.27318 Display eQTL plot
From Orbitofrontal Cortex cis-eQTL Distance: 55020 Pvalue: 0.00000000518678 Beta: 1.27318 Display eQTL plot
ENSG00000121716 Orbitofrontal Cortex cis-eQTL 39187 0.000000000373666 1.33768 Display eQTL plot
From Orbitofrontal Cortex cis-eQTL Distance: 39187 Pvalue: 0.000000000373666 Beta: 1.33768 Display eQTL plot
ENSG00000085514 Orbitofrontal Cortex cis-eQTL 6824 0.0000000811422 1.1951 Display eQTL plot
From Orbitofrontal Cortex cis-eQTL Distance: 6824 Pvalue: 0.0000000811422 Beta: 1.1951 Display eQTL plot
ENSG00000121716 Prefrontal Cortex cis-eQTL 39187 0.00000000100313 1.32568 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 39187 Pvalue: 0.00000000100313 Beta: 1.32568 Display eQTL plot
ENSG00000085514 Prefrontal Cortex cis-eQTL 6824 0.00000000115661 1.32223 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 6824 Pvalue: 0.00000000115661 Beta: 1.32223 Display eQTL plot
ENSG00000078487 Prefrontal Cortex cis-eQTL 0 0.000000226122 1.17339 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 0 Pvalue: 0.000000226122 Beta: 1.17339 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000473757 Cerebellum cis-eQTL 55020 0.000000000238466 1.34784 Display eQTL plot
From Cerebellum cis-eQTL Distance: 55020 Pvalue: 0.000000000238466 Beta: 1.34784 Display eQTL plot
ENST00000493499 Cerebellum cis-eQTL 56762 0.0000000150573 1.24434 Display eQTL plot
From Cerebellum cis-eQTL Distance: 56762 Pvalue: 0.0000000150573 Beta: 1.24434 Display eQTL plot
ENST00000472646 Cerebellum cis-eQTL 48628 0.0000000312912 -1.22354 Display eQTL plot
From Cerebellum cis-eQTL Distance: 48628 Pvalue: 0.0000000312912 Beta: -1.22354 Display eQTL plot
ENST00000493091 Cerebellum cis-eQTL 48905 0.00000000199649 1.29763 Display eQTL plot
From Cerebellum cis-eQTL Distance: 48905 Pvalue: 0.00000000199649 Beta: 1.29763 Display eQTL plot
ENST00000438231 Cerebellum cis-eQTL 47931 0.0000000275496 1.22722 Display eQTL plot
From Cerebellum cis-eQTL Distance: 47931 Pvalue: 0.0000000275496 Beta: 1.22722 Display eQTL plot
ENST00000609309 Cerebellum cis-eQTL 39522 0.0000000114652 1.25188 Display eQTL plot
From Cerebellum cis-eQTL Distance: 39522 Pvalue: 0.0000000114652 Beta: 1.25188 Display eQTL plot
ENST00000432297 Cerebellum cis-eQTL 7618 0.0000000320822 1.22281 Display eQTL plot
From Cerebellum cis-eQTL Distance: 7618 Pvalue: 0.0000000320822 Beta: 1.22281 Display eQTL plot
ENST00000493091 Hippocampus cis-eQTL 48905 0.00000000522376 1.27299 Display eQTL plot
From Hippocampus cis-eQTL Distance: 48905 Pvalue: 0.00000000522376 Beta: 1.27299 Display eQTL plot
ENST00000609309 Hippocampus cis-eQTL 39522 0.000000000123953 1.36224 Display eQTL plot
From Hippocampus cis-eQTL Distance: 39522 Pvalue: 0.000000000123953 Beta: 1.36224 Display eQTL plot
ENST00000493091 Orbitofrontal Cortex cis-eQTL 48905 0.0000000134364 1.24751 Display eQTL plot
From Orbitofrontal Cortex cis-eQTL Distance: 48905 Pvalue: 0.0000000134364 Beta: 1.24751 Display eQTL plot
ENST00000444874 Prefrontal Cortex cis-eQTL 39257 0.0000000152906 1.25492 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 39257 Pvalue: 0.0000000152906 Beta: 1.25492 Display eQTL plot
ENST00000493091 Prefrontal Cortex cis-eQTL 48905 0.000000000460735 1.34406 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 48905 Pvalue: 0.000000000460735 Beta: 1.34406 Display eQTL plot
ENST00000609309 Prefrontal Cortex cis-eQTL 39522 0.00000000164942 1.31352 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 39522 Pvalue: 0.00000000164942 Beta: 1.31352 Display eQTL plot
ENST00000432297 Prefrontal Cortex cis-eQTL 7618 0.000000000130895 1.37227 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 7618 Pvalue: 0.000000000130895 Beta: 1.37227 Display eQTL plot
ENST00000474013 Prefrontal Cortex cis-eQTL 30507 0.000000000295121 1.35426 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 30507 Pvalue: 0.000000000295121 Beta: 1.35426 Display eQTL plot

This SNP has no significant association with any pathology marker.