Single nucleotide variant rs10017543

Genomic position: 4:

Allele info and frequencies

Click here to go to dbSNP for more information.

This SNP has no significant association with diseases nor in high LD with index SNPs.

Click here to find this SNP in GTEx database.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000249244 Cerebellum cis-eQTL -4930 0.000000124178 0.910031 Display eQTL plot
From Cerebellum cis-eQTL Distance: -4930 Pvalue: 0.000000124178 Beta: 0.910031 Display eQTL plot
ENSG00000283050 Cerebellum cis-eQTL 5258 0.000000866584 0.860085 Display eQTL plot
From Cerebellum cis-eQTL Distance: 5258 Pvalue: 0.000000866584 Beta: 0.860085 Display eQTL plot
ENSG00000249244 Prefrontal Cortex cis-eQTL -4930 0.000000168466 0.908232 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -4930 Pvalue: 0.000000168466 Beta: 0.908232 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000505994 Cerebellum cis-eQTL -4930 0.0000000311503 0.942206 Display eQTL plot
From Cerebellum cis-eQTL Distance: -4930 Pvalue: 0.0000000311503 Beta: 0.942206 Display eQTL plot
ENST00000498873 Cerebellum cis-eQTL -88378 0.00000000369834 -0.987109 Display eQTL plot
From Cerebellum cis-eQTL Distance: -88378 Pvalue: 0.00000000369834 Beta: -0.987109 Display eQTL plot
ENST00000509612 Cerebellum cis-eQTL 107388 0.00000000227752 -0.996616 Display eQTL plot
From Cerebellum cis-eQTL Distance: 107388 Pvalue: 0.00000000227752 Beta: -0.996616 Display eQTL plot
ENST00000505994 Prefrontal Cortex cis-eQTL -4930 0.00000000533495 0.985453 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -4930 Pvalue: 0.00000000533495 Beta: 0.985453 Display eQTL plot
ENST00000510011 Prefrontal Cortex cis-eQTL -54555 0.000000112979 -0.917982 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -54555 Pvalue: 0.000000112979 Beta: -0.917982 Display eQTL plot

This SNP has no significant association with any pathology marker.