Single nucleotide variant rs1002152

Genomic position: 4:

Allele info and frequencies

Click here to go to dbSNP for more information.

This SNP has no significant association with diseases nor in high LD with index SNPs.

Click here to find this SNP in GTEx database.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000249244 Cerebellum cis-eQTL 39599 0.0000000614601 0.899385 Display eQTL plot
From Cerebellum cis-eQTL Distance: 39599 Pvalue: 0.0000000614601 Beta: 0.899385 Display eQTL plot
ENSG00000283050 Cerebellum cis-eQTL 53291 0.00000066246 0.841771 Display eQTL plot
From Cerebellum cis-eQTL Distance: 53291 Pvalue: 0.00000066246 Beta: 0.841771 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000505994 Cerebellum cis-eQTL 39599 0.00000000430561 0.955052 Display eQTL plot
From Cerebellum cis-eQTL Distance: 39599 Pvalue: 0.00000000430561 Beta: 0.955052 Display eQTL plot
ENST00000651444 Cerebellum cis-eQTL 53291 0.000000224105 0.869064 Display eQTL plot
From Cerebellum cis-eQTL Distance: 53291 Pvalue: 0.000000224105 Beta: 0.869064 Display eQTL plot
ENST00000498873 Cerebellum cis-eQTL -136411 0.00000000936003 -0.939634 Display eQTL plot
From Cerebellum cis-eQTL Distance: -136411 Pvalue: 0.00000000936003 Beta: -0.939634 Display eQTL plot
ENST00000509612 Cerebellum cis-eQTL 155421 0.00000000169617 -0.972715 Display eQTL plot
From Cerebellum cis-eQTL Distance: 155421 Pvalue: 0.00000000169617 Beta: -0.972715 Display eQTL plot
ENST00000505994 Prefrontal Cortex cis-eQTL 39599 0.0000000264842 0.923387 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 39599 Pvalue: 0.0000000264842 Beta: 0.923387 Display eQTL plot
ENST00000510011 Prefrontal Cortex cis-eQTL -102588 0.000000174183 -0.880587 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -102588 Pvalue: 0.000000174183 Beta: -0.880587 Display eQTL plot

This SNP has no significant association with any pathology marker.