Single nucleotide variant rs1006709

Genomic position: 7:

Allele info and frequencies

Click here to go to dbSNP for more information.

This SNP has no significant association with diseases nor in high LD with index SNPs.

Click here to find this SNP in GTEx database.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000230658 Cerebellum cis-eQTL 748 0.000000630031 0.78017 Display eQTL plot
From Cerebellum cis-eQTL Distance: 748 Pvalue: 0.000000630031 Beta: 0.78017 Display eQTL plot
ENSG00000136243 Cerebellum cis-eQTL -81361 0.0000000402728 -0.840993 Display eQTL plot
From Cerebellum cis-eQTL Distance: -81361 Pvalue: 0.0000000402728 Beta: -0.840993 Display eQTL plot
ENSG00000230658 Prefrontal Cortex cis-eQTL 748 0.000000121554 0.825152 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 748 Pvalue: 0.000000121554 Beta: 0.825152 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000419813 Cerebellum cis-eQTL 748 0.00000000327532 0.888674 Display eQTL plot
From Cerebellum cis-eQTL Distance: 748 Pvalue: 0.00000000327532 Beta: 0.888674 Display eQTL plot
ENST00000477844 Cerebellum cis-eQTL -93923 0.00000000292954 -0.890646 Display eQTL plot
From Cerebellum cis-eQTL Distance: -93923 Pvalue: 0.00000000292954 Beta: -0.890646 Display eQTL plot
ENST00000419813 Hippocampus cis-eQTL 748 0.00000000191903 0.898016 Display eQTL plot
From Hippocampus cis-eQTL Distance: 748 Pvalue: 0.00000000191903 Beta: 0.898016 Display eQTL plot
ENST00000419813 Prefrontal Cortex cis-eQTL 748 0.000000000788531 0.920645 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 748 Pvalue: 0.000000000788531 Beta: 0.920645 Display eQTL plot

This SNP has no significant association with any pathology marker.