Single nucleotide variant rs10196862

Genomic position: 2:

Allele info and frequencies

Click here to go to dbSNP for more information.

This SNP has no significant association with diseases nor in high LD with index SNPs.

Click here to find this SNP in GTEx database.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000152117 Cerebellum cis-eQTL 0 0.000000000153352 -1.29519 Display eQTL plot
From Cerebellum cis-eQTL Distance: 0 Pvalue: 0.000000000153352 Beta: -1.29519 Display eQTL plot
ENSG00000152117 Hippocampus cis-eQTL 0 0.000000029079 -1.16931 Display eQTL plot
From Hippocampus cis-eQTL Distance: 0 Pvalue: 0.000000029079 Beta: -1.16931 Display eQTL plot
ENSG00000152117 Prefrontal Cortex cis-eQTL 0 0.0000000000199625 -1.34665 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 0 Pvalue: 0.0000000000199625 Beta: -1.34665 Display eQTL plot
ENSG00000227632 Prefrontal Cortex trans-eQTL -1295492 0.00000000490178 0.682779 Display eQTL plot
From Prefrontal Cortex trans-eQTL -1295492 Pvalue: 0.00000000490178 Beta: 0.682779 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000438378 Cerebellum cis-eQTL 0 0.0000000706993 -1.14417 Display eQTL plot
From Cerebellum cis-eQTL Distance: 0 Pvalue: 0.0000000706993 Beta: -1.14417 Display eQTL plot
ENST00000438378 Hippocampus cis-eQTL 0 0.00000000423388 -1.2197 Display eQTL plot
From Hippocampus cis-eQTL Distance: 0 Pvalue: 0.00000000423388 Beta: -1.2197 Display eQTL plot
ENST00000438378 Orbitofrontal Cortex cis-eQTL 0 0.0000000178039 -1.19141 Display eQTL plot
From Orbitofrontal Cortex cis-eQTL Distance: 0 Pvalue: 0.0000000178039 Beta: -1.19141 Display eQTL plot
ENST00000438378 Prefrontal Cortex cis-eQTL 0 0.0000000000196524 -1.34694 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 0 Pvalue: 0.0000000000196524 Beta: -1.34694 Display eQTL plot

This SNP has no significant association with any pathology marker.