Single nucleotide variant rs10888958

Genomic position: 1:

Allele info and frequencies

Click here to go to dbSNP for more information.

This SNP has no significant association with diseases nor in high LD with index SNPs.

Click here to find this SNP in GTEx database.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000084072 Hippocampus cis-eQTL 0 0.0000000121894 0.913668 Display eQTL plot
From Hippocampus cis-eQTL Distance: 0 Pvalue: 0.0000000121894 Beta: 0.913668 Display eQTL plot
ENSG00000084072 Prefrontal Cortex cis-eQTL 0 0.000000000680233 0.974908 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 0 Pvalue: 0.000000000680233 Beta: 0.974908 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000495526 Cerebellum cis-eQTL 0 0.00000000746121 0.923413 Display eQTL plot
From Cerebellum cis-eQTL Distance: 0 Pvalue: 0.00000000746121 Beta: 0.923413 Display eQTL plot
ENST00000495526 Hippocampus cis-eQTL 0 0.0000000000268268 1.01885 Display eQTL plot
From Hippocampus cis-eQTL Distance: 0 Pvalue: 0.0000000000268268 Beta: 1.01885 Display eQTL plot
ENST00000495526 Prefrontal Cortex cis-eQTL 0 0.0000000000628662 1.01358 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 0 Pvalue: 0.0000000000628662 Beta: 1.01358 Display eQTL plot
ENST00000482751 Prefrontal Cortex cis-eQTL 0 0.000000162194 -0.864791 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 0 Pvalue: 0.000000162194 Beta: -0.864791 Display eQTL plot

This SNP has no significant association with any pathology marker.