Single nucleotide variant rs111946117

Genomic position: 1:

Allele info and frequencies

Click here to go to dbSNP for more information.

This SNP has no significant association with diseases nor in high LD with index SNPs.

Click here to find this SNP in GTEx database.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000189339 Cerebellum cis-eQTL 699 0.0000000605078 -1.29552 Display eQTL plot
From Cerebellum cis-eQTL Distance: 699 Pvalue: 0.0000000605078 Beta: -1.29552 Display eQTL plot
ENSG00000189339 Prefrontal Cortex cis-eQTL 699 0.000000000138463 -1.46759 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 699 Pvalue: 0.000000000138463 Beta: -1.46759 Display eQTL plot
ENSG00000215790 Prefrontal Cortex cis-eQTL 66008 0.000000471565 1.22965 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 66008 Pvalue: 0.000000471565 Beta: 1.22965 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000611123 Cerebellum cis-eQTL 2649 0.00000000664599 -1.36288 Display eQTL plot
From Cerebellum cis-eQTL Distance: 2649 Pvalue: 0.00000000664599 Beta: -1.36288 Display eQTL plot
ENST00000611123 Orbitofrontal Cortex cis-eQTL 2649 0.00000000466822 -1.27594 Display eQTL plot
From Orbitofrontal Cortex cis-eQTL Distance: 2649 Pvalue: 0.00000000466822 Beta: -1.27594 Display eQTL plot
ENST00000611123 Prefrontal Cortex cis-eQTL 2649 0.00000000154769 -1.4077 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 2649 Pvalue: 0.00000000154769 Beta: -1.4077 Display eQTL plot
ENST00000643905 Prefrontal Cortex cis-eQTL 68556 0.0000000566318 1.30258 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 68556 Pvalue: 0.0000000566318 Beta: 1.30258 Display eQTL plot

This SNP has no significant association with any pathology marker.