Single nucleotide variant rs12140979

Genomic position: 1:

Allele info and frequencies

Click here to go to dbSNP for more information.

This SNP has no significant association with diseases nor in high LD with index SNPs.

Click here to find this SNP in GTEx database.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000117226 Cerebellum cis-eQTL 5120 0.000000000948294 -0.998992 Display eQTL plot
From Cerebellum cis-eQTL Distance: 5120 Pvalue: 0.000000000948294 Beta: -0.998992 Display eQTL plot
ENSG00000117226 Hippocampus cis-eQTL 5120 0.000000000232543 -1.0237 Display eQTL plot
From Hippocampus cis-eQTL Distance: 5120 Pvalue: 0.000000000232543 Beta: -1.0237 Display eQTL plot
ENSG00000117226 Prefrontal Cortex cis-eQTL 5120 0.0000000070767 -0.964574 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 5120 Pvalue: 0.0000000070767 Beta: -0.964574 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000370481 Cerebellum cis-eQTL 5121 0.0000000000390321 -1.05265 Display eQTL plot
From Cerebellum cis-eQTL Distance: 5121 Pvalue: 0.0000000000390321 Beta: -1.05265 Display eQTL plot
ENST00000370481 Prefrontal Cortex cis-eQTL 5121 0.0000000000431703 -1.05504 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 5121 Pvalue: 0.0000000000431703 Beta: -1.05504 Display eQTL plot

This SNP has no significant association with any pathology marker.