Single nucleotide variant rs12475562

Genomic position: 2:

Allele info and frequencies

Click here to go to dbSNP for more information.

This SNP has no significant association with diseases nor in high LD with index SNPs.

Click here to find this SNP in GTEx database.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000152117 Cerebellum cis-eQTL -60556 0.000000000428042 -1.28263 Display eQTL plot
From Cerebellum cis-eQTL Distance: -60556 Pvalue: 0.000000000428042 Beta: -1.28263 Display eQTL plot
ENSG00000152117 Hippocampus cis-eQTL -60556 0.0000000760788 -1.15049 Display eQTL plot
From Hippocampus cis-eQTL Distance: -60556 Pvalue: 0.0000000760788 Beta: -1.15049 Display eQTL plot
ENSG00000152117 Prefrontal Cortex cis-eQTL -60556 0.000000262583 -1.12418 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -60556 Pvalue: 0.000000262583 Beta: -1.12418 Display eQTL plot
ENSG00000227632 Prefrontal Cortex trans-eQTL -1219629 0.0000000223586 0.660702 Display eQTL plot
From Prefrontal Cortex trans-eQTL -1219629 Pvalue: 0.0000000223586 Beta: 0.660702 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000438378 Cerebellum cis-eQTL -60556 0.0000000957257 -1.1437 Display eQTL plot
From Cerebellum cis-eQTL Distance: -60556 Pvalue: 0.0000000957257 Beta: -1.1437 Display eQTL plot

This SNP has no significant association with any pathology marker.