Single nucleotide variant rs1396639738

Genomic position: 1:

Click here to go to dbSNP for more information.

This SNP has no significant association with diseases nor in high LD with index SNPs.

Click here to find this SNP in GTEx database.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000270231 Cerebellum cis-eQTL 586502 0.000000220099 -0.907253 Display eQTL plot
From Cerebellum cis-eQTL Distance: 586502 Pvalue: 0.000000220099 Beta: -0.907253 Display eQTL plot
ENSG00000273136 Cerebellum cis-eQTL 212131 0.0000000868934 -0.930199 Display eQTL plot
From Cerebellum cis-eQTL Distance: 212131 Pvalue: 0.0000000868934 Beta: -0.930199 Display eQTL plot
ENSG00000226067 Cerebellum cis-eQTL 44950 0.000000255187 -0.903481 Display eQTL plot
From Cerebellum cis-eQTL Distance: 44950 Pvalue: 0.000000255187 Beta: -0.903481 Display eQTL plot
ENSG00000273136 Hippocampus cis-eQTL 212131 0.0000000686509 -0.935819 Display eQTL plot
From Hippocampus cis-eQTL Distance: 212131 Pvalue: 0.0000000686509 Beta: -0.935819 Display eQTL plot
ENSG00000273136 Prefrontal Cortex cis-eQTL 212131 0.00000000899817 -0.983156 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 212131 Pvalue: 0.00000000899817 Beta: -0.983156 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000583271 Cerebellum cis-eQTL 586502 0.0000000107449 -0.977497 Display eQTL plot
From Cerebellum cis-eQTL Distance: 586502 Pvalue: 0.0000000107449 Beta: -0.977497 Display eQTL plot
ENST00000652444 Cerebellum cis-eQTL 212131 0.00000000304338 -1.00349 Display eQTL plot
From Cerebellum cis-eQTL Distance: 212131 Pvalue: 0.00000000304338 Beta: -1.00349 Display eQTL plot
ENST00000621058 Cerebellum cis-eQTL 100778 0.0000000330928 -0.952744 Display eQTL plot
From Cerebellum cis-eQTL Distance: 100778 Pvalue: 0.0000000330928 Beta: -0.952744 Display eQTL plot
ENST00000622079 Cerebellum trans-eQTL 28592358 0.00000000423416 -0.680356 Display eQTL plot
From Cerebellum trans-eQTL 28592358 Pvalue: 0.00000000423416 Beta: -0.680356 Display eQTL plot
ENST00000652444 Prefrontal Cortex cis-eQTL 212131 0.000000000722603 -1.03271 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 212131 Pvalue: 0.000000000722603 Beta: -1.03271 Display eQTL plot

This SNP has no significant association with any pathology marker.