Single nucleotide variant rs1553236340

Genomic position: 1:

Click here to go to dbSNP for more information.

This SNP has no significant association with diseases nor in high LD with index SNPs.

Click here to find this SNP in GTEx database.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000270231 Cerebellum cis-eQTL -77669 0.000000541006 -0.963809 Display eQTL plot
From Cerebellum cis-eQTL Distance: -77669 Pvalue: 0.000000541006 Beta: -0.963809 Display eQTL plot
ENSG00000273136 Cerebellum cis-eQTL -381768 0.000000133355 -1.00307 Display eQTL plot
From Cerebellum cis-eQTL Distance: -381768 Pvalue: 0.000000133355 Beta: -1.00307 Display eQTL plot
ENSG00000226067 Cerebellum cis-eQTL -571094 0.0000000043039 -1.08676 Display eQTL plot
From Cerebellum cis-eQTL Distance: -571094 Pvalue: 0.0000000043039 Beta: -1.08676 Display eQTL plot
ENSG00000273136 Hippocampus cis-eQTL -381768 0.0000000870779 -1.01437 Display eQTL plot
From Hippocampus cis-eQTL Distance: -381768 Pvalue: 0.0000000870779 Beta: -1.01437 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000583271 Cerebellum cis-eQTL -94172 0.0000000360946 -1.03686 Display eQTL plot
From Cerebellum cis-eQTL Distance: -94172 Pvalue: 0.0000000360946 Beta: -1.03686 Display eQTL plot
ENST00000652444 Cerebellum cis-eQTL -463116 0.00000000651396 -1.07749 Display eQTL plot
From Cerebellum cis-eQTL Distance: -463116 Pvalue: 0.00000000651396 Beta: -1.07749 Display eQTL plot
ENST00000621058 Cerebellum cis-eQTL -571094 0.00000000065331 -1.12643 Display eQTL plot
From Cerebellum cis-eQTL Distance: -571094 Pvalue: 0.00000000065331 Beta: -1.12643 Display eQTL plot
ENST00000619653 Cerebellum trans-eQTL 28833860 0.0000000045632 -0.679319 Display eQTL plot
From Cerebellum trans-eQTL 28833860 Pvalue: 0.0000000045632 Beta: -0.679319 Display eQTL plot
ENST00000652444 Prefrontal Cortex cis-eQTL -463116 0.000000213296 -0.992677 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -463116 Pvalue: 0.000000213296 Beta: -0.992677 Display eQTL plot

This SNP has no significant association with any pathology marker.