Single nucleotide variant rs1553281948

Genomic position: 1:

Click here to go to dbSNP for more information.

This SNP has no significant association with diseases nor in high LD with index SNPs.

Click here to find this SNP in GTEx database.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000270231 Cerebellum cis-eQTL 469995 0.000000499268 -0.969543 Display eQTL plot
From Cerebellum cis-eQTL Distance: 469995 Pvalue: 0.000000499268 Beta: -0.969543 Display eQTL plot
ENSG00000273136 Cerebellum cis-eQTL 95624 0.000000354167 -0.979467 Display eQTL plot
From Cerebellum cis-eQTL Distance: 95624 Pvalue: 0.000000354167 Beta: -0.979467 Display eQTL plot
ENSG00000226067 Cerebellum cis-eQTL 0 0.0000000667051 -1.02488 Display eQTL plot
From Cerebellum cis-eQTL Distance: 0 Pvalue: 0.0000000667051 Beta: -1.02488 Display eQTL plot
ENSG00000273136 Hippocampus cis-eQTL 95624 0.00000010731 -1.01241 Display eQTL plot
From Hippocampus cis-eQTL Distance: 95624 Pvalue: 0.00000010731 Beta: -1.01241 Display eQTL plot
ENSG00000273136 Prefrontal Cortex cis-eQTL 95624 0.000000181871 -1.00024 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 95624 Pvalue: 0.000000181871 Beta: -1.00024 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000652444 Cerebellum cis-eQTL 95624 0.000000141318 -1.00502 Display eQTL plot
From Cerebellum cis-eQTL Distance: 95624 Pvalue: 0.000000141318 Beta: -1.00502 Display eQTL plot
ENST00000621058 Cerebellum cis-eQTL 0 0.0000000106611 -1.06993 Display eQTL plot
From Cerebellum cis-eQTL Distance: 0 Pvalue: 0.0000000106611 Beta: -1.06993 Display eQTL plot
ENST00000652444 Prefrontal Cortex cis-eQTL 95624 0.0000000269254 -1.04969 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 95624 Pvalue: 0.0000000269254 Beta: -1.04969 Display eQTL plot

This SNP has no significant association with any pathology marker.