Single nucleotide variant rs165873

Genomic position: 22:

Allele info and frequencies

Click here to go to dbSNP for more information.

This SNP has no significant association with diseases nor in high LD with index SNPs.

Click here to find this SNP in GTEx database.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000229107 Cerebellum cis-eQTL -197186 0.00000000475181 -0.918557 Display eQTL plot
From Cerebellum cis-eQTL Distance: -197186 Pvalue: 0.00000000475181 Beta: -0.918557 Display eQTL plot
ENSG00000183506 Prefrontal Cortex cis-eQTL 604830 0.0000000029073 0.925465 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 604830 Pvalue: 0.0000000029073 Beta: 0.925465 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000443839 Cerebellum cis-eQTL -211256 0.000000108882 -0.854121 Display eQTL plot
From Cerebellum cis-eQTL Distance: -211256 Pvalue: 0.000000108882 Beta: -0.854121 Display eQTL plot
ENST00000411545 Cerebellum cis-eQTL -197186 0.000000000709965 -0.952606 Display eQTL plot
From Cerebellum cis-eQTL Distance: -197186 Pvalue: 0.000000000709965 Beta: -0.952606 Display eQTL plot
ENST00000466772 Cerebellum cis-eQTL -140813 0.000000101935 -0.8556 Display eQTL plot
From Cerebellum cis-eQTL Distance: -140813 Pvalue: 0.000000101935 Beta: -0.8556 Display eQTL plot
ENST00000360806 Cerebellum cis-eQTL 604889 0.0000000000335073 1.00077 Display eQTL plot
From Cerebellum cis-eQTL Distance: 604889 Pvalue: 0.0000000000335073 Beta: 1.00077 Display eQTL plot
ENST00000466772 Prefrontal Cortex cis-eQTL -140813 0.000000009765 -0.902693 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -140813 Pvalue: 0.000000009765 Beta: -0.902693 Display eQTL plot
ENST00000482030 Prefrontal Cortex cis-eQTL -155177 0.00000000828953 -0.905861 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -155177 Pvalue: 0.00000000828953 Beta: -0.905861 Display eQTL plot
ENST00000360806 Prefrontal Cortex cis-eQTL 604889 0.0000000000000166914 1.08992 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 604889 Pvalue: 0.0000000000000166914 Beta: 1.08992 Display eQTL plot

This SNP has no significant association with any pathology marker.