Single nucleotide variant rs165878

Genomic position: 22:

Allele info and frequencies

Click here to go to dbSNP for more information.

This SNP has no significant association with diseases nor in high LD with index SNPs.

Click here to find this SNP in GTEx database.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000223553 Cerebellum cis-eQTL -192808 0.000000400295 -0.837065 Display eQTL plot
From Cerebellum cis-eQTL Distance: -192808 Pvalue: 0.000000400295 Beta: -0.837065 Display eQTL plot
ENSG00000229107 Cerebellum cis-eQTL -178738 0.00000000224832 -0.94752 Display eQTL plot
From Cerebellum cis-eQTL Distance: -178738 Pvalue: 0.00000000224832 Beta: -0.94752 Display eQTL plot
ENSG00000183506 Prefrontal Cortex cis-eQTL 623278 0.00000000399193 0.934588 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 623278 Pvalue: 0.00000000399193 Beta: 0.934588 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000443839 Cerebellum cis-eQTL -192808 0.000000178945 -0.85648 Display eQTL plot
From Cerebellum cis-eQTL Distance: -192808 Pvalue: 0.000000178945 Beta: -0.85648 Display eQTL plot
ENST00000411545 Cerebellum cis-eQTL -178738 0.0000000176242 -0.907472 Display eQTL plot
From Cerebellum cis-eQTL Distance: -178738 Pvalue: 0.0000000176242 Beta: -0.907472 Display eQTL plot
ENST00000466772 Cerebellum cis-eQTL -122365 0.0000000214317 -0.903426 Display eQTL plot
From Cerebellum cis-eQTL Distance: -122365 Pvalue: 0.0000000214317 Beta: -0.903426 Display eQTL plot
ENST00000360806 Cerebellum cis-eQTL 623337 0.00000000000362554 1.04832 Display eQTL plot
From Cerebellum cis-eQTL Distance: 623337 Pvalue: 0.00000000000362554 Beta: 1.04832 Display eQTL plot
ENST00000466772 Prefrontal Cortex cis-eQTL -122365 0.00000000174141 -0.949837 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -122365 Pvalue: 0.00000000174141 Beta: -0.949837 Display eQTL plot
ENST00000482030 Prefrontal Cortex cis-eQTL -136729 0.0000000120245 -0.913221 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -136729 Pvalue: 0.0000000120245 Beta: -0.913221 Display eQTL plot
ENST00000360806 Prefrontal Cortex cis-eQTL 623337 0.0000000000000431137 1.09766 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 623337 Pvalue: 0.0000000000000431137 Beta: 1.09766 Display eQTL plot

This SNP has no significant association with any pathology marker.