Single nucleotide variant rs178052

Genomic position: 22:

Allele info and frequencies

Click here to go to dbSNP for more information.

This SNP has no significant association with diseases nor in high LD with index SNPs.

Click here to find this SNP in GTEx database.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000229107 Cerebellum cis-eQTL -151973 0.00000000478336 -0.933355 Display eQTL plot
From Cerebellum cis-eQTL Distance: -151973 Pvalue: 0.00000000478336 Beta: -0.933355 Display eQTL plot
ENSG00000183506 Prefrontal Cortex cis-eQTL 650043 0.000000000882927 0.961827 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 650043 Pvalue: 0.000000000882927 Beta: 0.961827 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000411545 Cerebellum cis-eQTL -151973 0.0000000219411 -0.902937 Display eQTL plot
From Cerebellum cis-eQTL Distance: -151973 Pvalue: 0.0000000219411 Beta: -0.902937 Display eQTL plot
ENST00000466772 Cerebellum cis-eQTL -95600 0.0000000267808 -0.898762 Display eQTL plot
From Cerebellum cis-eQTL Distance: -95600 Pvalue: 0.0000000267808 Beta: -0.898762 Display eQTL plot
ENST00000360806 Cerebellum cis-eQTL 650102 0.00000000000466813 1.04493 Display eQTL plot
From Cerebellum cis-eQTL Distance: 650102 Pvalue: 0.00000000000466813 Beta: 1.04493 Display eQTL plot
ENST00000360806 Hippocampus cis-eQTL 650102 0.0000000459076 0.887235 Display eQTL plot
From Hippocampus cis-eQTL Distance: 650102 Pvalue: 0.0000000459076 Beta: 0.887235 Display eQTL plot
ENST00000466772 Prefrontal Cortex cis-eQTL -95600 0.00000000749038 -0.922553 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -95600 Pvalue: 0.00000000749038 Beta: -0.922553 Display eQTL plot
ENST00000482030 Prefrontal Cortex cis-eQTL -109964 0.00000000782997 -0.921689 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -109964 Pvalue: 0.00000000782997 Beta: -0.921689 Display eQTL plot
ENST00000360806 Prefrontal Cortex cis-eQTL 650102 0.00000000000000334598 1.12355 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 650102 Pvalue: 0.00000000000000334598 Beta: 1.12355 Display eQTL plot

This SNP has no significant association with any pathology marker.