Single nucleotide variant rs178083

Genomic position: 22:

Allele info and frequencies

Click here to go to dbSNP for more information.

This SNP has no significant association with diseases nor in high LD with index SNPs.

Click here to find this SNP in GTEx database.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000223553 Cerebellum cis-eQTL -235846 0.000000181549 -0.81651 Display eQTL plot
From Cerebellum cis-eQTL Distance: -235846 Pvalue: 0.000000181549 Beta: -0.81651 Display eQTL plot
ENSG00000229107 Cerebellum cis-eQTL -221776 0.000000000706478 -0.923354 Display eQTL plot
From Cerebellum cis-eQTL Distance: -221776 Pvalue: 0.000000000706478 Beta: -0.923354 Display eQTL plot
ENSG00000183506 Prefrontal Cortex cis-eQTL 580240 0.0000000168191 0.864501 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 580240 Pvalue: 0.0000000168191 Beta: 0.864501 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000443839 Cerebellum cis-eQTL -235846 0.000000071727 -0.836802 Display eQTL plot
From Cerebellum cis-eQTL Distance: -235846 Pvalue: 0.000000071727 Beta: -0.836802 Display eQTL plot
ENST00000411545 Cerebellum cis-eQTL -221776 0.0000000021306 -0.904603 Display eQTL plot
From Cerebellum cis-eQTL Distance: -221776 Pvalue: 0.0000000021306 Beta: -0.904603 Display eQTL plot
ENST00000466772 Cerebellum cis-eQTL -165403 0.00000000450358 -0.89125 Display eQTL plot
From Cerebellum cis-eQTL Distance: -165403 Pvalue: 0.00000000450358 Beta: -0.89125 Display eQTL plot
ENST00000360806 Cerebellum cis-eQTL 580299 0.00000000000185009 1.00822 Display eQTL plot
From Cerebellum cis-eQTL Distance: 580299 Pvalue: 0.00000000000185009 Beta: 1.00822 Display eQTL plot
ENST00000466772 Prefrontal Cortex cis-eQTL -165403 0.00000000000739896 -0.987475 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -165403 Pvalue: 0.00000000000739896 Beta: -0.987475 Display eQTL plot
ENST00000482030 Prefrontal Cortex cis-eQTL -179767 0.0000000222091 -0.859061 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -179767 Pvalue: 0.0000000222091 Beta: -0.859061 Display eQTL plot
ENST00000360806 Prefrontal Cortex cis-eQTL 580299 0.0000000000000832207 1.04003 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 580299 Pvalue: 0.0000000000000832207 Beta: 1.04003 Display eQTL plot

This SNP has no significant association with any pathology marker.