Single nucleotide variant rs17838147

Genomic position: 1:

Allele info and frequencies

Click here to go to dbSNP for more information.

This SNP has no significant association with diseases nor in high LD with index SNPs.

Click here to find this SNP in GTEx database.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000270231 Cerebellum cis-eQTL 621487 0.000000249484 -0.983254 Display eQTL plot
From Cerebellum cis-eQTL Distance: 621487 Pvalue: 0.000000249484 Beta: -0.983254 Display eQTL plot
ENSG00000273136 Cerebellum cis-eQTL 247116 0.000000151829 -0.996864 Display eQTL plot
From Cerebellum cis-eQTL Distance: 247116 Pvalue: 0.000000151829 Beta: -0.996864 Display eQTL plot
ENSG00000226067 Cerebellum cis-eQTL 79935 0.00000000610936 -1.07602 Display eQTL plot
From Cerebellum cis-eQTL Distance: 79935 Pvalue: 0.00000000610936 Beta: -1.07602 Display eQTL plot
ENSG00000273136 Prefrontal Cortex cis-eQTL 247116 0.000000305763 -0.980302 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 247116 Pvalue: 0.000000305763 Beta: -0.980302 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000652444 Cerebellum cis-eQTL 247116 0.0000000215962 -1.04662 Display eQTL plot
From Cerebellum cis-eQTL Distance: 247116 Pvalue: 0.0000000215962 Beta: -1.04662 Display eQTL plot
ENST00000621058 Cerebellum cis-eQTL 135763 0.000000000631028 -1.12408 Display eQTL plot
From Cerebellum cis-eQTL Distance: 135763 Pvalue: 0.000000000631028 Beta: -1.12408 Display eQTL plot
ENST00000619653 Cerebellum trans-eQTL 28086815 0.0000000019762 -0.690682 Display eQTL plot
From Cerebellum trans-eQTL 28086815 Pvalue: 0.0000000019762 Beta: -0.690682 Display eQTL plot
ENST00000622079 Cerebellum trans-eQTL 28557373 0.0000000158275 -0.661447 Display eQTL plot
From Cerebellum trans-eQTL 28557373 Pvalue: 0.0000000158275 Beta: -0.661447 Display eQTL plot
ENST00000652444 Prefrontal Cortex cis-eQTL 247116 0.0000000412402 -1.03335 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 247116 Pvalue: 0.0000000412402 Beta: -1.03335 Display eQTL plot

This SNP has no significant association with any pathology marker.