Single nucleotide variant rs180801

Genomic position: 22:

Allele info and frequencies

Click here to go to dbSNP for more information.

This SNP has no significant association with diseases nor in high LD with index SNPs.

Click here to find this SNP in GTEx database.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000284070 Orbitofrontal Cortex trans-eQTL 1333478 0.0000000155764 0.661685 Display eQTL plot
From Orbitofrontal Cortex trans-eQTL 1333478 Pvalue: 0.0000000155764 Beta: 0.661685 Display eQTL plot
ENSG00000284070 Prefrontal Cortex trans-eQTL 1333478 0.00000000170864 0.697063 Display eQTL plot
From Prefrontal Cortex trans-eQTL 1333478 Pvalue: 0.00000000170864 Beta: 0.697063 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000398241 Orbitofrontal Cortex trans-eQTL -2189408 0.0000000135385 0.66376 Display eQTL plot
From Orbitofrontal Cortex trans-eQTL -2189408 Pvalue: 0.0000000135385 Beta: 0.66376 Display eQTL plot
ENST00000639904 Orbitofrontal Cortex trans-eQTL 1333478 0.00000000253474 0.687355 Display eQTL plot
From Orbitofrontal Cortex trans-eQTL 1333478 Pvalue: 0.00000000253474 Beta: 0.687355 Display eQTL plot
ENST00000436990 Prefrontal Cortex cis-eQTL 0 0.00000000385334 -0.903574 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 0 Pvalue: 0.00000000385334 Beta: -0.903574 Display eQTL plot
ENST00000639904 Prefrontal Cortex trans-eQTL 1333478 0.00000000979586 0.672938 Display eQTL plot
From Prefrontal Cortex trans-eQTL 1333478 Pvalue: 0.00000000979586 Beta: 0.672938 Display eQTL plot

This SNP has no significant association with any pathology marker.