Single nucleotide variant rs180807

Genomic position: 22:

Allele info and frequencies

Click here to go to dbSNP for more information.

This SNP has no significant association with diseases nor in high LD with index SNPs.

Click here to find this SNP in GTEx database.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000284070 Orbitofrontal Cortex trans-eQTL 1331738 0.00000000652188 0.674311 Display eQTL plot
From Orbitofrontal Cortex trans-eQTL 1331738 Pvalue: 0.00000000652188 Beta: 0.674311 Display eQTL plot
ENSG00000169668 Prefrontal Cortex trans-eQTL -2191148 0.0000000220337 0.660924 Display eQTL plot
From Prefrontal Cortex trans-eQTL -2191148 Pvalue: 0.0000000220337 Beta: 0.660924 Display eQTL plot
ENSG00000284070 Prefrontal Cortex trans-eQTL 1331738 0.00000000294491 0.689787 Display eQTL plot
From Prefrontal Cortex trans-eQTL 1331738 Pvalue: 0.00000000294491 Beta: 0.689787 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000398241 Orbitofrontal Cortex trans-eQTL -2191148 0.00000000802733 0.671354 Display eQTL plot
From Orbitofrontal Cortex trans-eQTL -2191148 Pvalue: 0.00000000802733 Beta: 0.671354 Display eQTL plot
ENST00000639904 Orbitofrontal Cortex trans-eQTL 1331738 0.00000000163336 0.6932 Display eQTL plot
From Orbitofrontal Cortex trans-eQTL 1331738 Pvalue: 0.00000000163336 Beta: 0.6932 Display eQTL plot
ENST00000436990 Prefrontal Cortex cis-eQTL 0 0.0000000160572 -0.887384 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 0 Pvalue: 0.0000000160572 Beta: -0.887384 Display eQTL plot
ENST00000639904 Prefrontal Cortex trans-eQTL 1331738 0.0000000150395 0.666652 Display eQTL plot
From Prefrontal Cortex trans-eQTL 1331738 Pvalue: 0.0000000150395 Beta: 0.666652 Display eQTL plot

This SNP has no significant association with any pathology marker.