Single nucleotide variant rs199502

Genomic position: 17:

Allele info and frequencies

Click here to go to dbSNP for more information.

This SNP has no significant association with diseases nor in high LD with index SNPs.

Click here to find this SNP in GTEx database.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000214401 Cerebellum cis-eQTL 588258 0.0000000773017 1.08193 Display eQTL plot
From Cerebellum cis-eQTL Distance: 588258 Pvalue: 0.0000000773017 Beta: 1.08193 Display eQTL plot
ENSG00000176681 Cerebellum cis-eQTL 447187 0.000000100926 1.0745 Display eQTL plot
From Cerebellum cis-eQTL Distance: 447187 Pvalue: 0.000000100926 Beta: 1.0745 Display eQTL plot
ENSG00000263503 Prefrontal Cortex trans-eQTL -1182641 0.000000000348487 0.717152 Display eQTL plot
From Prefrontal Cortex trans-eQTL -1182641 Pvalue: 0.000000000348487 Beta: 0.717152 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000639356 Prefrontal Cortex cis-eQTL -559614 0.000000215528 1.05469 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -559614 Pvalue: 0.000000215528 Beta: 1.05469 Display eQTL plot
ENST00000650501 Prefrontal Cortex trans-eQTL -1196602 0.0000000076306 0.676532 Display eQTL plot
From Prefrontal Cortex trans-eQTL -1196602 Pvalue: 0.0000000076306 Beta: 0.676532 Display eQTL plot
ENST00000580257 Prefrontal Cortex trans-eQTL -1182641 0.0000000266384 0.65803 Display eQTL plot
From Prefrontal Cortex trans-eQTL -1182641 Pvalue: 0.0000000266384 Beta: 0.65803 Display eQTL plot

This SNP has no significant association with any pathology marker.