Single nucleotide variant rs2072516

Genomic position: 22:

Allele info and frequencies

Click here to go to dbSNP for more information.

This SNP has no significant association with diseases nor in high LD with index SNPs.

Click here to find this SNP in GTEx database.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000229107 Cerebellum cis-eQTL -80084 0.00000000755886 -0.868401 Display eQTL plot
From Cerebellum cis-eQTL Distance: -80084 Pvalue: 0.00000000755886 Beta: -0.868401 Display eQTL plot
ENSG00000183506 Prefrontal Cortex cis-eQTL 721932 0.0000000654875 0.824438 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 721932 Pvalue: 0.0000000654875 Beta: 0.824438 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000411545 Cerebellum cis-eQTL -80084 0.00000000396064 -0.880111 Display eQTL plot
From Cerebellum cis-eQTL Distance: -80084 Pvalue: 0.00000000396064 Beta: -0.880111 Display eQTL plot
ENST00000466772 Cerebellum cis-eQTL -23711 0.000000155618 -0.807597 Display eQTL plot
From Cerebellum cis-eQTL Distance: -23711 Pvalue: 0.000000155618 Beta: -0.807597 Display eQTL plot
ENST00000360806 Cerebellum cis-eQTL 721991 0.000000000979988 0.904072 Display eQTL plot
From Cerebellum cis-eQTL Distance: 721991 Pvalue: 0.000000000979988 Beta: 0.904072 Display eQTL plot
ENST00000466772 Prefrontal Cortex cis-eQTL -23711 0.000000124837 -0.810841 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -23711 Pvalue: 0.000000124837 Beta: -0.810841 Display eQTL plot
ENST00000360806 Prefrontal Cortex cis-eQTL 721991 0.00000000000895771 0.970127 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 721991 Pvalue: 0.00000000000895771 Beta: 0.970127 Display eQTL plot

This SNP has no significant association with any pathology marker.