Single nucleotide variant rs2238549

Genomic position: 19:

Allele info and frequencies

Click here to go to dbSNP for more information.

This SNP has no significant association with diseases nor in high LD with index SNPs.

Click here to find this SNP in GTEx database.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000266066 Cerebellum trans-eQTL Distance not available. 0.0000000000337352 0.739435 Display eQTL plot
From Cerebellum trans-eQTL Distance not available. Pvalue: 0.0000000000337352 Beta: 0.739435 Display eQTL plot
ENSG00000266066 Hippocampus trans-eQTL Distance not available. 0.0000000199232 0.658003 Display eQTL plot
From Hippocampus trans-eQTL Distance not available. Pvalue: 0.0000000199232 Beta: 0.658003 Display eQTL plot
ENSG00000266066 Orbitofrontal Cortex trans-eQTL Distance not available. 0.000000000157282 0.722168 Display eQTL plot
From Orbitofrontal Cortex trans-eQTL Distance not available. Pvalue: 0.000000000157282 Beta: 0.722168 Display eQTL plot
ENSG00000266066 Prefrontal Cortex trans-eQTL Distance not available. 0.0000000000553937 0.738426 Display eQTL plot
From Prefrontal Cortex trans-eQTL Distance not available. Pvalue: 0.0000000000553937 Beta: 0.738426 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000578759 Cerebellum trans-eQTL Distance not available. 0.0000000000313192 0.740236 Display eQTL plot
From Cerebellum trans-eQTL Distance not available. Pvalue: 0.0000000000313192 Beta: 0.740236 Display eQTL plot
ENST00000578759 Hippocampus trans-eQTL Distance not available. 0.0000000218675 0.656597 Display eQTL plot
From Hippocampus trans-eQTL Distance not available. Pvalue: 0.0000000218675 Beta: 0.656597 Display eQTL plot
ENST00000578759 Orbitofrontal Cortex trans-eQTL Distance not available. 0.0000000000532849 0.734445 Display eQTL plot
From Orbitofrontal Cortex trans-eQTL Distance not available. Pvalue: 0.0000000000532849 Beta: 0.734445 Display eQTL plot
ENST00000578759 Prefrontal Cortex trans-eQTL Distance not available. 0.00000000000163224 0.774161 Display eQTL plot
From Prefrontal Cortex trans-eQTL Distance not available. Pvalue: 0.00000000000163224 Beta: 0.774161 Display eQTL plot

This SNP has no significant association with any pathology marker.