Single nucleotide variant rs2277805

Genomic position: 21:

Allele info and frequencies

Click here to go to dbSNP for more information.

This SNP has no significant association with diseases nor in high LD with index SNPs.

Click here to find this SNP in GTEx database.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000160221 Cerebellum cis-eQTL -59308 0.000000059648 1.42269 Display eQTL plot
From Cerebellum cis-eQTL Distance: -59308 Pvalue: 0.000000059648 Beta: 1.42269 Display eQTL plot
ENSG00000160221 Hippocampus cis-eQTL -59308 0.000000039797 1.43693 Display eQTL plot
From Hippocampus cis-eQTL Distance: -59308 Pvalue: 0.000000039797 Beta: 1.43693 Display eQTL plot
ENSG00000280071 Orbitofrontal Cortex trans-eQTL -38945877 0.00000000509798 -0.677775 Display eQTL plot
From Orbitofrontal Cortex trans-eQTL -38945877 Pvalue: 0.00000000509798 Beta: -0.677775 Display eQTL plot
ENSG00000160221 Prefrontal Cortex cis-eQTL -59308 0.000000285017 1.3645 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -59308 Pvalue: 0.000000285017 Beta: 1.3645 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000291574 Cerebellum cis-eQTL 0 0.0000000369813 1.43947 Display eQTL plot
From Cerebellum cis-eQTL Distance: 0 Pvalue: 0.0000000369813 Beta: 1.43947 Display eQTL plot
ENST00000427803 Cerebellum cis-eQTL -59316 0.000000109441 1.4007 Display eQTL plot
From Cerebellum cis-eQTL Distance: -59316 Pvalue: 0.000000109441 Beta: 1.4007 Display eQTL plot
ENST00000291577 Cerebellum cis-eQTL -59381 0.00000000504302 1.50474 Display eQTL plot
From Cerebellum cis-eQTL Distance: -59381 Pvalue: 0.00000000504302 Beta: 1.50474 Display eQTL plot
ENST00000617716 Cerebellum trans-eQTL -38919568 0.0000000275256 -0.65309 Display eQTL plot
From Cerebellum trans-eQTL -38919568 Pvalue: 0.0000000275256 Beta: -0.65309 Display eQTL plot
ENST00000291577 Hippocampus cis-eQTL -59381 0.000000000860709 1.55702 Display eQTL plot
From Hippocampus cis-eQTL Distance: -59381 Pvalue: 0.000000000860709 Beta: 1.55702 Display eQTL plot
ENST00000493883 Orbitofrontal Cortex cis-eQTL -59337 0.0000000155075 1.5089 Display eQTL plot
From Orbitofrontal Cortex cis-eQTL Distance: -59337 Pvalue: 0.0000000155075 Beta: 1.5089 Display eQTL plot
ENST00000291577 Orbitofrontal Cortex cis-eQTL -59381 0.00000000944113 1.52547 Display eQTL plot
From Orbitofrontal Cortex cis-eQTL Distance: -59381 Pvalue: 0.00000000944113 Beta: 1.52547 Display eQTL plot
ENST00000620528 Orbitofrontal Cortex trans-eQTL -38945877 0.0000000072582 -0.672792 Display eQTL plot
From Orbitofrontal Cortex trans-eQTL -38945877 Pvalue: 0.0000000072582 Beta: -0.672792 Display eQTL plot
ENST00000291574 Prefrontal Cortex cis-eQTL 0 0.00000000939703 1.48459 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 0 Pvalue: 0.00000000939703 Beta: 1.48459 Display eQTL plot
ENST00000422875 Prefrontal Cortex cis-eQTL 0 0.00000000716616 -1.49316 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 0 Pvalue: 0.00000000716616 Beta: -1.49316 Display eQTL plot
ENST00000291576 Prefrontal Cortex cis-eQTL -33097 0.000000196468 1.3788 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -33097 Pvalue: 0.000000196468 Beta: 1.3788 Display eQTL plot
ENST00000291577 Prefrontal Cortex cis-eQTL -59381 0.00000000352143 1.51502 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -59381 Pvalue: 0.00000000352143 Beta: 1.51502 Display eQTL plot
ENST00000620528 Prefrontal Cortex trans-eQTL -38945877 0.0000000291794 -0.65663 Display eQTL plot
From Prefrontal Cortex trans-eQTL -38945877 Pvalue: 0.0000000291794 Beta: -0.65663 Display eQTL plot
ENST00000617716 Prefrontal Cortex trans-eQTL -38919568 0.00000000628042 -0.6793 Display eQTL plot
From Prefrontal Cortex trans-eQTL -38919568 Pvalue: 0.00000000628042 Beta: -0.6793 Display eQTL plot

This SNP has no significant association with any pathology marker.