Single nucleotide variant rs2277806

Genomic position: 21:

Allele info and frequencies

Click here to go to dbSNP for more information.

This SNP has no significant association with diseases nor in high LD with index SNPs.

Click here to find this SNP in GTEx database.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000160221 Cerebellum cis-eQTL -43841 0.000000182319 1.14475 Display eQTL plot
From Cerebellum cis-eQTL Distance: -43841 Pvalue: 0.000000182319 Beta: 1.14475 Display eQTL plot
ENSG00000275464 Cerebellum trans-eQTL -38935035 0.00000000228683 -0.688736 Display eQTL plot
From Cerebellum trans-eQTL -38935035 Pvalue: 0.00000000228683 Beta: -0.688736 Display eQTL plot
ENSG00000241945 Orbitofrontal Cortex cis-eQTL -17604 0.0000000127628 1.23574 Display eQTL plot
From Orbitofrontal Cortex cis-eQTL Distance: -17604 Pvalue: 0.0000000127628 Beta: 1.23574 Display eQTL plot
ENSG00000280071 Orbitofrontal Cortex trans-eQTL -38961344 0.0000000115005 -0.666154 Display eQTL plot
From Orbitofrontal Cortex trans-eQTL -38961344 Pvalue: 0.0000000115005 Beta: -0.666154 Display eQTL plot
ENSG00000275464 Orbitofrontal Cortex trans-eQTL -38935035 0.00000000133631 -0.695824 Display eQTL plot
From Orbitofrontal Cortex trans-eQTL -38935035 Pvalue: 0.00000000133631 Beta: -0.695824 Display eQTL plot
ENSG00000160221 Prefrontal Cortex cis-eQTL -43841 0.0000000750916 1.17347 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -43841 Pvalue: 0.0000000750916 Beta: 1.17347 Display eQTL plot
ENSG00000275464 Prefrontal Cortex trans-eQTL -38935035 0.00000000305266 -0.689299 Display eQTL plot
From Prefrontal Cortex trans-eQTL -38935035 Pvalue: 0.00000000305266 Beta: -0.689299 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000291576 Cerebellum cis-eQTL -17630 0.0000000279639 1.20067 Display eQTL plot
From Cerebellum cis-eQTL Distance: -17630 Pvalue: 0.0000000279639 Beta: 1.20067 Display eQTL plot
ENST00000427803 Cerebellum cis-eQTL -43849 0.00000000160573 1.27529 Display eQTL plot
From Cerebellum cis-eQTL Distance: -43849 Pvalue: 0.00000000160573 Beta: 1.27529 Display eQTL plot
ENST00000617716 Cerebellum trans-eQTL -38935035 0.0000000020807 -0.689997 Display eQTL plot
From Cerebellum trans-eQTL -38935035 Pvalue: 0.0000000020807 Beta: -0.689997 Display eQTL plot
ENST00000291577 Hippocampus cis-eQTL -43914 0.0000000212981 1.2083 Display eQTL plot
From Hippocampus cis-eQTL Distance: -43914 Pvalue: 0.0000000212981 Beta: 1.2083 Display eQTL plot
ENST00000291576 Orbitofrontal Cortex cis-eQTL -17630 0.00000000714903 1.25132 Display eQTL plot
From Orbitofrontal Cortex cis-eQTL Distance: -17630 Pvalue: 0.00000000714903 Beta: 1.25132 Display eQTL plot
ENST00000493883 Orbitofrontal Cortex cis-eQTL -43870 0.00000000296796 1.27403 Display eQTL plot
From Orbitofrontal Cortex cis-eQTL Distance: -43870 Pvalue: 0.00000000296796 Beta: 1.27403 Display eQTL plot
ENST00000291577 Orbitofrontal Cortex cis-eQTL -43914 0.0000000114675 1.23865 Display eQTL plot
From Orbitofrontal Cortex cis-eQTL Distance: -43914 Pvalue: 0.0000000114675 Beta: 1.23865 Display eQTL plot
ENST00000617716 Orbitofrontal Cortex trans-eQTL -38935035 0.00000000128286 -0.696355 Display eQTL plot
From Orbitofrontal Cortex trans-eQTL -38935035 Pvalue: 0.00000000128286 Beta: -0.696355 Display eQTL plot
ENST00000291576 Prefrontal Cortex cis-eQTL -17630 0.000000101502 1.16442 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -17630 Pvalue: 0.000000101502 Beta: 1.16442 Display eQTL plot
ENST00000480786 Prefrontal Cortex cis-eQTL -43905 0.000000148259 1.15281 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -43905 Pvalue: 0.000000148259 Beta: 1.15281 Display eQTL plot
ENST00000291577 Prefrontal Cortex cis-eQTL -43914 0.000000167747 1.14897 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -43914 Pvalue: 0.000000167747 Beta: 1.14897 Display eQTL plot
ENST00000617716 Prefrontal Cortex trans-eQTL -38935035 0.00000000440692 -0.684259 Display eQTL plot
From Prefrontal Cortex trans-eQTL -38935035 Pvalue: 0.00000000440692 Beta: -0.684259 Display eQTL plot

This SNP has no significant association with any pathology marker.