Single nucleotide variant rs2292553

Genomic position: 2:

Allele info and frequencies

Click here to go to dbSNP for more information.

This SNP has no significant association with diseases nor in high LD with index SNPs.

Click here to find this SNP in GTEx database.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000261338 Cerebellum cis-eQTL 24714 0.0000000266265 0.83241 Display eQTL plot
From Cerebellum cis-eQTL Distance: 24714 Pvalue: 0.0000000266265 Beta: 0.83241 Display eQTL plot
ENSG00000261338 Orbitofrontal Cortex cis-eQTL 24714 0.00000000120528 0.900632 Display eQTL plot
From Orbitofrontal Cortex cis-eQTL Distance: 24714 Pvalue: 0.00000000120528 Beta: 0.900632 Display eQTL plot
ENSG00000261338 Prefrontal Cortex cis-eQTL 24714 0.0000000679785 0.824516 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 24714 Pvalue: 0.0000000679785 Beta: 0.824516 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000562328 Cerebellum cis-eQTL 24714 0.000000161245 0.795404 Display eQTL plot
From Cerebellum cis-eQTL Distance: 24714 Pvalue: 0.000000161245 Beta: 0.795404 Display eQTL plot
ENST00000562328 Orbitofrontal Cortex cis-eQTL 24714 0.000000000352513 0.920535 Display eQTL plot
From Orbitofrontal Cortex cis-eQTL Distance: 24714 Pvalue: 0.000000000352513 Beta: 0.920535 Display eQTL plot
ENST00000562328 Prefrontal Cortex cis-eQTL 24714 0.000000000578767 0.911224 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 24714 Pvalue: 0.000000000578767 Beta: 0.911224 Display eQTL plot

This SNP has no significant association with any pathology marker.