Single nucleotide variant rs2608824

Genomic position: 4:

Allele info and frequencies

Click here to go to dbSNP for more information.

This SNP has no significant association with diseases nor in high LD with index SNPs.

Click here to find this SNP in GTEx database.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000163682 Cerebellum cis-eQTL 6362 0.0000000000900438 -1.15745 Display eQTL plot
From Cerebellum cis-eQTL Distance: 6362 Pvalue: 0.0000000000900438 Beta: -1.15745 Display eQTL plot
ENSG00000237550 Cerebellum trans-eQTL Distance not available. 0.000000000235069 0.717437 Display eQTL plot
From Cerebellum trans-eQTL Distance not available. Pvalue: 0.000000000235069 Beta: 0.717437 Display eQTL plot
ENSG00000163682 Hippocampus cis-eQTL 6362 0.0000000000134796 -1.19009 Display eQTL plot
From Hippocampus cis-eQTL Distance: 6362 Pvalue: 0.0000000000134796 Beta: -1.19009 Display eQTL plot
ENSG00000237550 Hippocampus trans-eQTL Distance not available. 0.000000000205795 0.719014 Display eQTL plot
From Hippocampus trans-eQTL Distance not available. Pvalue: 0.000000000205795 Beta: 0.719014 Display eQTL plot
ENSG00000163682 Orbitofrontal Cortex cis-eQTL 6362 0.00000000000636353 -1.20218 Display eQTL plot
From Orbitofrontal Cortex cis-eQTL Distance: 6362 Pvalue: 0.00000000000636353 Beta: -1.20218 Display eQTL plot
ENSG00000237550 Orbitofrontal Cortex trans-eQTL Distance not available. 0.0000000000306012 0.740485 Display eQTL plot
From Orbitofrontal Cortex trans-eQTL Distance not available. Pvalue: 0.0000000000306012 Beta: 0.740485 Display eQTL plot
ENSG00000163682 Prefrontal Cortex cis-eQTL 6362 0.000000000298146 -1.13911 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 6362 Pvalue: 0.000000000298146 Beta: -1.13911 Display eQTL plot
ENSG00000237550 Prefrontal Cortex trans-eQTL Distance not available. 0.0000000000646501 0.736714 Display eQTL plot
From Prefrontal Cortex trans-eQTL Distance not available. Pvalue: 0.0000000000646501 Beta: 0.736714 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000295955 Cerebellum cis-eQTL 7965 0.00000000000485523 -1.20643 Display eQTL plot
From Cerebellum cis-eQTL Distance: 7965 Pvalue: 0.00000000000485523 Beta: -1.20643 Display eQTL plot
ENST00000506581 Cerebellum cis-eQTL 7980 0.000000000453955 1.12711 Display eQTL plot
From Cerebellum cis-eQTL Distance: 7980 Pvalue: 0.000000000453955 Beta: 1.12711 Display eQTL plot
ENST00000418824 Cerebellum trans-eQTL Distance not available. 0.000000011148 0.666608 Display eQTL plot
From Cerebellum trans-eQTL Distance not available. Pvalue: 0.000000011148 Beta: 0.666608 Display eQTL plot
ENST00000466501 Cerebellum trans-eQTL Distance not available. 0.0000000000604261 0.733052 Display eQTL plot
From Cerebellum trans-eQTL Distance not available. Pvalue: 0.0000000000604261 Beta: 0.733052 Display eQTL plot
ENST00000295955 Hippocampus cis-eQTL 7965 0.0000000257074 -1.03919 Display eQTL plot
From Hippocampus cis-eQTL Distance: 7965 Pvalue: 0.0000000257074 Beta: -1.03919 Display eQTL plot
ENST00000508595 Hippocampus cis-eQTL 7978 0.0000000304408 -1.03507 Display eQTL plot
From Hippocampus cis-eQTL Distance: 7978 Pvalue: 0.0000000304408 Beta: -1.03507 Display eQTL plot
ENST00000506581 Hippocampus cis-eQTL 7980 0.00000000157104 1.10206 Display eQTL plot
From Hippocampus cis-eQTL Distance: 7980 Pvalue: 0.00000000157104 Beta: 1.10206 Display eQTL plot
ENST00000466501 Hippocampus trans-eQTL Distance not available. 0.000000000779987 0.702729 Display eQTL plot
From Hippocampus trans-eQTL Distance not available. Pvalue: 0.000000000779987 Beta: 0.702729 Display eQTL plot
ENST00000295955 Orbitofrontal Cortex cis-eQTL 7965 0.0000000113152 -1.05866 Display eQTL plot
From Orbitofrontal Cortex cis-eQTL Distance: 7965 Pvalue: 0.0000000113152 Beta: -1.05866 Display eQTL plot
ENST00000508595 Orbitofrontal Cortex cis-eQTL 7978 0.00000000000458714 -1.20732 Display eQTL plot
From Orbitofrontal Cortex cis-eQTL Distance: 7978 Pvalue: 0.00000000000458714 Beta: -1.20732 Display eQTL plot
ENST00000506581 Orbitofrontal Cortex cis-eQTL 7980 0.00000000100397 1.11128 Display eQTL plot
From Orbitofrontal Cortex cis-eQTL Distance: 7980 Pvalue: 0.00000000100397 Beta: 1.11128 Display eQTL plot
ENST00000466501 Orbitofrontal Cortex trans-eQTL Distance not available. 0.000000000090783 0.728484 Display eQTL plot
From Orbitofrontal Cortex trans-eQTL Distance not available. Pvalue: 0.000000000090783 Beta: 0.728484 Display eQTL plot
ENST00000295955 Prefrontal Cortex cis-eQTL 7965 0.00000000000403721 -1.2128 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 7965 Pvalue: 0.00000000000403721 Beta: -1.2128 Display eQTL plot
ENST00000506581 Prefrontal Cortex cis-eQTL 7980 0.0000000544424 1.02474 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 7980 Pvalue: 0.0000000544424 Beta: 1.02474 Display eQTL plot
ENST00000504470 Prefrontal Cortex cis-eQTL 8465 0.0000000745904 -1.0167 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 8465 Pvalue: 0.0000000745904 Beta: -1.0167 Display eQTL plot
ENST00000466501 Prefrontal Cortex trans-eQTL Distance not available. 0.0000000000672056 0.736282 Display eQTL plot
From Prefrontal Cortex trans-eQTL Distance not available. Pvalue: 0.0000000000672056 Beta: 0.736282 Display eQTL plot

This SNP has no significant association with any pathology marker.