Single nucleotide variant rs2687956

Genomic position: 4:

Allele info and frequencies

Click here to go to dbSNP for more information.

This SNP has no significant association with diseases nor in high LD with index SNPs.

Click here to find this SNP in GTEx database.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000163682 Cerebellum cis-eQTL 0 0.0000000218733 -1.0443 Display eQTL plot
From Cerebellum cis-eQTL Distance: 0 Pvalue: 0.0000000218733 Beta: -1.0443 Display eQTL plot
ENSG00000163682 Hippocampus cis-eQTL 0 0.000000000850889 -1.11592 Display eQTL plot
From Hippocampus cis-eQTL Distance: 0 Pvalue: 0.000000000850889 Beta: -1.11592 Display eQTL plot
ENSG00000237550 Hippocampus trans-eQTL Distance not available. 0.00000000224602 0.688977 Display eQTL plot
From Hippocampus trans-eQTL Distance not available. Pvalue: 0.00000000224602 Beta: 0.688977 Display eQTL plot
ENSG00000163682 Orbitofrontal Cortex cis-eQTL 0 0.00000000138703 -1.10592 Display eQTL plot
From Orbitofrontal Cortex cis-eQTL Distance: 0 Pvalue: 0.00000000138703 Beta: -1.10592 Display eQTL plot
ENSG00000237550 Orbitofrontal Cortex trans-eQTL Distance not available. 0.00000000487776 0.678391 Display eQTL plot
From Orbitofrontal Cortex trans-eQTL Distance not available. Pvalue: 0.00000000487776 Beta: 0.678391 Display eQTL plot
ENSG00000163682 Prefrontal Cortex cis-eQTL 0 0.0000000000750288 -1.21968 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 0 Pvalue: 0.0000000000750288 Beta: -1.21968 Display eQTL plot
ENSG00000237550 Prefrontal Cortex trans-eQTL Distance not available. 0.00000000000323299 0.767698 Display eQTL plot
From Prefrontal Cortex trans-eQTL Distance not available. Pvalue: 0.00000000000323299 Beta: 0.767698 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000295955 Cerebellum cis-eQTL 0 0.0000000000649046 -1.16464 Display eQTL plot
From Cerebellum cis-eQTL Distance: 0 Pvalue: 0.0000000000649046 Beta: -1.16464 Display eQTL plot
ENST00000506581 Cerebellum cis-eQTL 0 0.00000000136551 1.10625 Display eQTL plot
From Cerebellum cis-eQTL Distance: 0 Pvalue: 0.00000000136551 Beta: 1.10625 Display eQTL plot
ENST00000466501 Cerebellum trans-eQTL Distance not available. 0.000000000704202 0.704018 Display eQTL plot
From Cerebellum trans-eQTL Distance not available. Pvalue: 0.000000000704202 Beta: 0.704018 Display eQTL plot
ENST00000506581 Hippocampus cis-eQTL 0 0.00000000798058 1.06791 Display eQTL plot
From Hippocampus cis-eQTL Distance: 0 Pvalue: 0.00000000798058 Beta: 1.06791 Display eQTL plot
ENST00000466501 Hippocampus trans-eQTL Distance not available. 0.0000000038959 0.681505 Display eQTL plot
From Hippocampus trans-eQTL Distance not available. Pvalue: 0.0000000038959 Beta: 0.681505 Display eQTL plot
ENST00000295955 Prefrontal Cortex cis-eQTL 0 0.00000000000519383 -1.2662 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 0 Pvalue: 0.00000000000519383 Beta: -1.2662 Display eQTL plot
ENST00000506581 Prefrontal Cortex cis-eQTL 0 0.0000000102757 1.11546 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 0 Pvalue: 0.0000000102757 Beta: 1.11546 Display eQTL plot
ENST00000504470 Prefrontal Cortex cis-eQTL 0 0.0000000889862 -1.0601 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 0 Pvalue: 0.0000000889862 Beta: -1.0601 Display eQTL plot
ENST00000466501 Prefrontal Cortex trans-eQTL Distance not available. 0.00000000000675745 0.760486 Display eQTL plot
From Prefrontal Cortex trans-eQTL Distance not available. Pvalue: 0.00000000000675745 Beta: 0.760486 Display eQTL plot

This SNP has no significant association with any pathology marker.