Single nucleotide variant rs2838486

Genomic position: 21:

Allele info and frequencies

Click here to go to dbSNP for more information.

This SNP has no significant association with diseases nor in high LD with index SNPs.

Click here to find this SNP in GTEx database.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000160221 Cerebellum cis-eQTL -48209 0.000000367651 1.11138 Display eQTL plot
From Cerebellum cis-eQTL Distance: -48209 Pvalue: 0.000000367651 Beta: 1.11138 Display eQTL plot
ENSG00000275464 Cerebellum trans-eQTL -38930667 0.00000000320205 -0.684191 Display eQTL plot
From Cerebellum trans-eQTL -38930667 Pvalue: 0.00000000320205 Beta: -0.684191 Display eQTL plot
ENSG00000241945 Orbitofrontal Cortex cis-eQTL -21972 0.00000000261067 1.2634 Display eQTL plot
From Orbitofrontal Cortex cis-eQTL Distance: -21972 Pvalue: 0.00000000261067 Beta: 1.2634 Display eQTL plot
ENSG00000275464 Orbitofrontal Cortex trans-eQTL -38930667 0.0000000127695 -0.66462 Display eQTL plot
From Orbitofrontal Cortex trans-eQTL -38930667 Pvalue: 0.0000000127695 Beta: -0.66462 Display eQTL plot
ENSG00000160221 Prefrontal Cortex cis-eQTL -48209 0.000000139703 1.14386 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -48209 Pvalue: 0.000000139703 Beta: 1.14386 Display eQTL plot
ENSG00000275464 Prefrontal Cortex trans-eQTL -38930667 0.00000000539834 -0.68143 Display eQTL plot
From Prefrontal Cortex trans-eQTL -38930667 Pvalue: 0.00000000539834 Beta: -0.68143 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000291576 Cerebellum cis-eQTL -21998 0.000000142585 1.14135 Display eQTL plot
From Cerebellum cis-eQTL Distance: -21998 Pvalue: 0.000000142585 Beta: 1.14135 Display eQTL plot
ENST00000427803 Cerebellum cis-eQTL -48217 0.0000000022703 1.25466 Display eQTL plot
From Cerebellum cis-eQTL Distance: -48217 Pvalue: 0.0000000022703 Beta: 1.25466 Display eQTL plot
ENST00000291577 Hippocampus cis-eQTL -48282 0.0000000256862 1.19148 Display eQTL plot
From Hippocampus cis-eQTL Distance: -48282 Pvalue: 0.0000000256862 Beta: 1.19148 Display eQTL plot
ENST00000291576 Orbitofrontal Cortex cis-eQTL -21998 0.00000000453317 1.24952 Display eQTL plot
From Orbitofrontal Cortex cis-eQTL Distance: -21998 Pvalue: 0.00000000453317 Beta: 1.24952 Display eQTL plot
ENST00000493883 Orbitofrontal Cortex cis-eQTL -48238 0.000000000540236 1.30087 Display eQTL plot
From Orbitofrontal Cortex cis-eQTL Distance: -48238 Pvalue: 0.000000000540236 Beta: 1.30087 Display eQTL plot
ENST00000617716 Orbitofrontal Cortex trans-eQTL -38930667 0.00000000363559 -0.682455 Display eQTL plot
From Orbitofrontal Cortex trans-eQTL -38930667 Pvalue: 0.00000000363559 Beta: -0.682455 Display eQTL plot
ENST00000291576 Prefrontal Cortex cis-eQTL -21998 0.000000112077 1.15056 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -21998 Pvalue: 0.000000112077 Beta: 1.15056 Display eQTL plot
ENST00000493883 Prefrontal Cortex cis-eQTL -48238 0.000000231677 1.12814 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -48238 Pvalue: 0.000000231677 Beta: 1.12814 Display eQTL plot
ENST00000480786 Prefrontal Cortex cis-eQTL -48273 0.000000137154 1.14443 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -48273 Pvalue: 0.000000137154 Beta: 1.14443 Display eQTL plot
ENST00000624748 Prefrontal Cortex trans-eQTL -38960533 0.0000000111491 -0.671057 Display eQTL plot
From Prefrontal Cortex trans-eQTL -38960533 Pvalue: 0.0000000111491 Beta: -0.671057 Display eQTL plot
ENST00000617716 Prefrontal Cortex trans-eQTL -38930667 0.00000000211155 -0.694259 Display eQTL plot
From Prefrontal Cortex trans-eQTL -38930667 Pvalue: 0.00000000211155 Beta: -0.694259 Display eQTL plot

This SNP has no significant association with any pathology marker.