Single nucleotide variant rs2838827

Genomic position: 21:

Allele info and frequencies

Click here to go to dbSNP for more information.

This SNP has no significant association with diseases nor in high LD with index SNPs.

Click here to find this SNP in GTEx database.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000223768 Hippocampus cis-eQTL -51819 0.0000000191052 -1.15564 Display eQTL plot
From Hippocampus cis-eQTL Distance: -51819 Pvalue: 0.0000000191052 Beta: -1.15564 Display eQTL plot
ENSG00000223768 Orbitofrontal Cortex cis-eQTL -51819 0.00000000188878 -1.21292 Display eQTL plot
From Orbitofrontal Cortex cis-eQTL Distance: -51819 Pvalue: 0.00000000188878 Beta: -1.21292 Display eQTL plot
ENSG00000223768 Prefrontal Cortex cis-eQTL -51819 0.000000248735 -1.08937 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -51819 Pvalue: 0.000000248735 Beta: -1.08937 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000400362 Hippocampus cis-eQTL -51819 0.0000000325017 -1.14142 Display eQTL plot
From Hippocampus cis-eQTL Distance: -51819 Pvalue: 0.0000000325017 Beta: -1.14142 Display eQTL plot
ENST00000400362 Orbitofrontal Cortex cis-eQTL -51819 0.0000000037764 -1.19652 Display eQTL plot
From Orbitofrontal Cortex cis-eQTL Distance: -51819 Pvalue: 0.0000000037764 Beta: -1.19652 Display eQTL plot
ENST00000400362 Prefrontal Cortex cis-eQTL -51819 0.00000014306 -1.10605 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -51819 Pvalue: 0.00000014306 Beta: -1.10605 Display eQTL plot
ENST00000433465 Prefrontal Cortex cis-eQTL -58547 0.0000000669803 -1.12805 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -58547 Pvalue: 0.0000000669803 Beta: -1.12805 Display eQTL plot

This SNP has no significant association with any pathology marker.