Single nucleotide variant rs2844004

Genomic position: 22:

Allele info and frequencies

Click here to go to dbSNP for more information.

This SNP has no significant association with diseases nor in high LD with index SNPs.

Click here to find this SNP in GTEx database.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000273295 Cerebellum cis-eQTL -87269 0.00000000109673 0.989321 Display eQTL plot
From Cerebellum cis-eQTL Distance: -87269 Pvalue: 0.00000000109673 Beta: 0.989321 Display eQTL plot
ENSG00000225282 Cerebellum cis-eQTL 64763 0.0000000456252 0.914023 Display eQTL plot
From Cerebellum cis-eQTL Distance: 64763 Pvalue: 0.0000000456252 Beta: 0.914023 Display eQTL plot
ENSG00000273295 Hippocampus cis-eQTL -87269 0.00000000497959 0.960596 Display eQTL plot
From Hippocampus cis-eQTL Distance: -87269 Pvalue: 0.00000000497959 Beta: 0.960596 Display eQTL plot
ENSG00000133433 Orbitofrontal Cortex cis-eQTL -33151 0.0000000183706 -0.933849 Display eQTL plot
From Orbitofrontal Cortex cis-eQTL Distance: -33151 Pvalue: 0.0000000183706 Beta: -0.933849 Display eQTL plot
ENSG00000273295 Prefrontal Cortex cis-eQTL -87269 0.000000014758 0.936914 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -87269 Pvalue: 0.000000014758 Beta: 0.936914 Display eQTL plot
ENSG00000133433 Prefrontal Cortex cis-eQTL -33151 0.0000000318435 -0.920545 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -33151 Pvalue: 0.0000000318435 Beta: -0.920545 Display eQTL plot
ENSG00000099984 Prefrontal Cortex cis-eQTL 10422 0.0000000188968 -0.93173 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 10422 Pvalue: 0.0000000188968 Beta: -0.93173 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000609510 Cerebellum cis-eQTL -87269 0.00000000198711 0.978312 Display eQTL plot
From Cerebellum cis-eQTL Distance: -87269 Pvalue: 0.00000000198711 Beta: 0.978312 Display eQTL plot
ENST00000609510 Hippocampus cis-eQTL -87269 0.000000000882184 0.993268 Display eQTL plot
From Hippocampus cis-eQTL Distance: -87269 Pvalue: 0.000000000882184 Beta: 0.993268 Display eQTL plot
ENST00000609510 Orbitofrontal Cortex cis-eQTL -87269 0.00000000407317 0.964546 Display eQTL plot
From Orbitofrontal Cortex cis-eQTL Distance: -87269 Pvalue: 0.00000000407317 Beta: 0.964546 Display eQTL plot
ENST00000290765 Orbitofrontal Cortex cis-eQTL -33151 0.00000000643757 -0.955485 Display eQTL plot
From Orbitofrontal Cortex cis-eQTL Distance: -33151 Pvalue: 0.00000000643757 Beta: -0.955485 Display eQTL plot
ENST00000609510 Prefrontal Cortex cis-eQTL -87269 0.0000000022426 0.974173 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -87269 Pvalue: 0.0000000022426 Beta: 0.974173 Display eQTL plot
ENST00000290765 Prefrontal Cortex cis-eQTL -33151 0.0000000100963 -0.944736 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -33151 Pvalue: 0.0000000100963 Beta: -0.944736 Display eQTL plot

This SNP has no significant association with any pathology marker.