Single nucleotide variant rs28550692

Genomic position: 1:

Click here to go to dbSNP for more information.

This SNP has no significant association with diseases nor in high LD with index SNPs.

Click here to find this SNP in GTEx database.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000270231 Cerebellum cis-eQTL 523170 0.000000122924 -0.962856 Display eQTL plot
From Cerebellum cis-eQTL Distance: 523170 Pvalue: 0.000000122924 Beta: -0.962856 Display eQTL plot
ENSG00000273136 Cerebellum cis-eQTL 148799 0.0000000316595 -0.996246 Display eQTL plot
From Cerebellum cis-eQTL Distance: 148799 Pvalue: 0.0000000316595 Beta: -0.996246 Display eQTL plot
ENSG00000226067 Cerebellum cis-eQTL 0 0.00000000344071 -1.04564 Display eQTL plot
From Cerebellum cis-eQTL Distance: 0 Pvalue: 0.00000000344071 Beta: -1.04564 Display eQTL plot
ENSG00000273136 Hippocampus cis-eQTL 148799 0.0000000714782 -0.976518 Display eQTL plot
From Hippocampus cis-eQTL Distance: 148799 Pvalue: 0.0000000714782 Beta: -0.976518 Display eQTL plot
ENSG00000273136 Prefrontal Cortex cis-eQTL 148799 0.0000000557566 -0.984498 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 148799 Pvalue: 0.0000000557566 Beta: -0.984498 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000583271 Cerebellum cis-eQTL 523170 0.000000151819 -0.957417 Display eQTL plot
From Cerebellum cis-eQTL Distance: 523170 Pvalue: 0.000000151819 Beta: -0.957417 Display eQTL plot
ENST00000652444 Cerebellum cis-eQTL 148799 0.0000000143546 -1.01455 Display eQTL plot
From Cerebellum cis-eQTL Distance: 148799 Pvalue: 0.0000000143546 Beta: -1.01455 Display eQTL plot
ENST00000621058 Cerebellum cis-eQTL 37446 0.000000000548102 -1.08228 Display eQTL plot
From Cerebellum cis-eQTL Distance: 37446 Pvalue: 0.000000000548102 Beta: -1.08228 Display eQTL plot
ENST00000619653 Cerebellum trans-eQTL 28185132 0.00000000462666 -0.679127 Display eQTL plot
From Cerebellum trans-eQTL 28185132 Pvalue: 0.00000000462666 Beta: -0.679127 Display eQTL plot
ENST00000652444 Prefrontal Cortex cis-eQTL 148799 0.00000000342599 -1.04734 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 148799 Pvalue: 0.00000000342599 Beta: -1.04734 Display eQTL plot

This SNP has no significant association with any pathology marker.