Single nucleotide variant rs28716135

Genomic position: 1:

Allele info and frequencies

Click here to go to dbSNP for more information.

This SNP has no significant association with diseases nor in high LD with index SNPs.

Click here to find this SNP in GTEx database.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000270231 Cerebellum cis-eQTL 634620 0.00000017922 -0.949049 Display eQTL plot
From Cerebellum cis-eQTL Distance: 634620 Pvalue: 0.00000017922 Beta: -0.949049 Display eQTL plot
ENSG00000273136 Cerebellum cis-eQTL 260249 0.0000000325438 -0.991369 Display eQTL plot
From Cerebellum cis-eQTL Distance: 260249 Pvalue: 0.0000000325438 Beta: -0.991369 Display eQTL plot
ENSG00000226067 Cerebellum cis-eQTL 93068 0.00000000112858 -1.06376 Display eQTL plot
From Cerebellum cis-eQTL Distance: 93068 Pvalue: 0.00000000112858 Beta: -1.06376 Display eQTL plot
ENSG00000273136 Hippocampus cis-eQTL 260249 0.000000104387 -0.962918 Display eQTL plot
From Hippocampus cis-eQTL Distance: 260249 Pvalue: 0.000000104387 Beta: -0.962918 Display eQTL plot
ENSG00000273136 Prefrontal Cortex cis-eQTL 260249 0.000000128178 -0.960216 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 260249 Pvalue: 0.000000128178 Beta: -0.960216 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000583271 Cerebellum cis-eQTL 634620 0.000000103717 -0.96308 Display eQTL plot
From Cerebellum cis-eQTL Distance: 634620 Pvalue: 0.000000103717 Beta: -0.96308 Display eQTL plot
ENST00000652444 Cerebellum cis-eQTL 260249 0.00000000423017 -1.03687 Display eQTL plot
From Cerebellum cis-eQTL Distance: 260249 Pvalue: 0.00000000423017 Beta: -1.03687 Display eQTL plot
ENST00000621058 Cerebellum cis-eQTL 148896 0.0000000000365492 -1.12557 Display eQTL plot
From Cerebellum cis-eQTL Distance: 148896 Pvalue: 0.0000000000365492 Beta: -1.12557 Display eQTL plot
ENST00000616993 Cerebellum trans-eQTL 24098332 0.0000000171413 -0.660259 Display eQTL plot
From Cerebellum trans-eQTL 24098332 Pvalue: 0.0000000171413 Beta: -0.660259 Display eQTL plot
ENST00000619653 Cerebellum trans-eQTL 28073682 0.000000000572118 -0.706617 Display eQTL plot
From Cerebellum trans-eQTL 28073682 Pvalue: 0.000000000572118 Beta: -0.706617 Display eQTL plot
ENST00000622079 Cerebellum trans-eQTL 28544240 0.0000000102688 -0.667803 Display eQTL plot
From Cerebellum trans-eQTL 28544240 Pvalue: 0.0000000102688 Beta: -0.667803 Display eQTL plot
ENST00000652444 Prefrontal Cortex cis-eQTL 260249 0.0000000126027 -1.01552 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 260249 Pvalue: 0.0000000126027 Beta: -1.01552 Display eQTL plot

This SNP has no significant association with any pathology marker.