Single nucleotide variant rs3108473

Genomic position: 2:

Allele info and frequencies

Click here to go to dbSNP for more information.

This SNP has no significant association with diseases nor in high LD with index SNPs.

Click here to find this SNP in GTEx database.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000152117 Cerebellum cis-eQTL 0 0.000000000300194 -1.28093 Display eQTL plot
From Cerebellum cis-eQTL Distance: 0 Pvalue: 0.000000000300194 Beta: -1.28093 Display eQTL plot
ENSG00000152117 Hippocampus cis-eQTL 0 0.0000000113944 -1.19448 Display eQTL plot
From Hippocampus cis-eQTL Distance: 0 Pvalue: 0.0000000113944 Beta: -1.19448 Display eQTL plot
ENSG00000152117 Prefrontal Cortex cis-eQTL 0 0.00000000014597 -1.30721 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 0 Pvalue: 0.00000000014597 Beta: -1.30721 Display eQTL plot
ENSG00000227632 Prefrontal Cortex trans-eQTL -1287830 0.0000000175894 0.664318 Display eQTL plot
From Prefrontal Cortex trans-eQTL -1287830 Pvalue: 0.0000000175894 Beta: 0.664318 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000438378 Cerebellum cis-eQTL 0 0.0000000191053 -1.18076 Display eQTL plot
From Cerebellum cis-eQTL Distance: 0 Pvalue: 0.0000000191053 Beta: -1.18076 Display eQTL plot
ENST00000438378 Hippocampus cis-eQTL 0 0.00000000109955 -1.25195 Display eQTL plot
From Hippocampus cis-eQTL Distance: 0 Pvalue: 0.00000000109955 Beta: -1.25195 Display eQTL plot
ENST00000438378 Prefrontal Cortex cis-eQTL 0 0.000000000372461 -1.28723 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 0 Pvalue: 0.000000000372461 Beta: -1.28723 Display eQTL plot

This SNP has no significant association with any pathology marker.