Single nucleotide variant rs3817564

Genomic position: 2:

Allele info and frequencies

Click here to go to dbSNP for more information.

This SNP has no significant association with diseases nor in high LD with index SNPs.

Click here to find this SNP in GTEx database.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000152117 Cerebellum cis-eQTL 0 0.0000000000713706 -1.3026 Display eQTL plot
From Cerebellum cis-eQTL Distance: 0 Pvalue: 0.0000000000713706 Beta: -1.3026 Display eQTL plot
ENSG00000152117 Hippocampus cis-eQTL 0 0.0000000158555 -1.1783 Display eQTL plot
From Hippocampus cis-eQTL Distance: 0 Pvalue: 0.0000000158555 Beta: -1.1783 Display eQTL plot
ENSG00000152117 Prefrontal Cortex cis-eQTL 0 0.0000000000109306 -1.34828 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 0 Pvalue: 0.0000000000109306 Beta: -1.34828 Display eQTL plot
ENSG00000227632 Prefrontal Cortex trans-eQTL -1286118 0.00000000564934 0.680792 Display eQTL plot
From Prefrontal Cortex trans-eQTL -1286118 Pvalue: 0.00000000564934 Beta: 0.680792 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000438378 Cerebellum cis-eQTL 0 0.00000000747378 -1.19781 Display eQTL plot
From Cerebellum cis-eQTL Distance: 0 Pvalue: 0.00000000747378 Beta: -1.19781 Display eQTL plot
ENST00000438378 Hippocampus cis-eQTL 0 0.00000000301326 -1.22034 Display eQTL plot
From Hippocampus cis-eQTL Distance: 0 Pvalue: 0.00000000301326 Beta: -1.22034 Display eQTL plot
ENST00000438378 Prefrontal Cortex cis-eQTL 0 0.0000000000248079 -1.33308 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 0 Pvalue: 0.0000000000248079 Beta: -1.33308 Display eQTL plot

This SNP has no significant association with any pathology marker.