Single nucleotide variant rs3853577

Genomic position: 1:

Click here to go to dbSNP for more information.

This SNP has no significant association with diseases nor in high LD with index SNPs.

Click here to find this SNP in GTEx database.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000270231 Cerebellum cis-eQTL 549158 0.0000000850303 -0.969778 Display eQTL plot
From Cerebellum cis-eQTL Distance: 549158 Pvalue: 0.0000000850303 Beta: -0.969778 Display eQTL plot
ENSG00000273136 Cerebellum cis-eQTL 174787 0.0000000269655 -0.997544 Display eQTL plot
From Cerebellum cis-eQTL Distance: 174787 Pvalue: 0.0000000269655 Beta: -0.997544 Display eQTL plot
ENSG00000226067 Cerebellum cis-eQTL 7606 0.000000000372201 -1.08686 Display eQTL plot
From Cerebellum cis-eQTL Distance: 7606 Pvalue: 0.000000000372201 Beta: -1.08686 Display eQTL plot
ENSG00000273136 Hippocampus cis-eQTL 174787 0.000000101059 -0.96544 Display eQTL plot
From Hippocampus cis-eQTL Distance: 174787 Pvalue: 0.000000101059 Beta: -0.96544 Display eQTL plot
ENSG00000273136 Prefrontal Cortex cis-eQTL 174787 0.0000000327396 -0.995093 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 174787 Pvalue: 0.0000000327396 Beta: -0.995093 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000583271 Cerebellum cis-eQTL 549158 0.0000000605347 -0.978186 Display eQTL plot
From Cerebellum cis-eQTL Distance: 549158 Pvalue: 0.0000000605347 Beta: -0.978186 Display eQTL plot
ENST00000652444 Cerebellum cis-eQTL 174787 0.00000000670811 -1.02885 Display eQTL plot
From Cerebellum cis-eQTL Distance: 174787 Pvalue: 0.00000000670811 Beta: -1.02885 Display eQTL plot
ENST00000621058 Cerebellum cis-eQTL 63434 0.0000000000471565 -1.12332 Display eQTL plot
From Cerebellum cis-eQTL Distance: 63434 Pvalue: 0.0000000000471565 Beta: -1.12332 Display eQTL plot
ENST00000619653 Cerebellum trans-eQTL 28159144 0.000000000717562 -0.703782 Display eQTL plot
From Cerebellum trans-eQTL 28159144 Pvalue: 0.000000000717562 Beta: -0.703782 Display eQTL plot
ENST00000610119 Cerebellum trans-eQTL 28247355 0.0000000257259 -0.654126 Display eQTL plot
From Cerebellum trans-eQTL 28247355 Pvalue: 0.0000000257259 Beta: -0.654126 Display eQTL plot
ENST00000622079 Cerebellum trans-eQTL 28629702 0.00000000350394 -0.682961 Display eQTL plot
From Cerebellum trans-eQTL 28629702 Pvalue: 0.00000000350394 Beta: -0.682961 Display eQTL plot
ENST00000652444 Prefrontal Cortex cis-eQTL 174787 0.00000000203445 -1.05573 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 174787 Pvalue: 0.00000000203445 Beta: -1.05573 Display eQTL plot

This SNP has no significant association with any pathology marker.