Single nucleotide variant rs6132062

Genomic position: 20:

Allele info and frequencies

Click here to go to dbSNP for more information.

This SNP has no significant association with diseases nor in high LD with index SNPs.

Click here to find this SNP in GTEx database.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000101307 Cerebellum cis-eQTL -295694 0.00000000188426 1.0462 Display eQTL plot
From Cerebellum cis-eQTL Distance: -295694 Pvalue: 0.00000000188426 Beta: 1.0462 Display eQTL plot
ENSG00000225774 Cerebellum trans-eQTL Distance not available. 0.0000000136481 0.663641 Display eQTL plot
From Cerebellum trans-eQTL Distance not available. Pvalue: 0.0000000136481 Beta: 0.663641 Display eQTL plot
ENSG00000101307 Orbitofrontal Cortex cis-eQTL -295694 0.00000000121091 1.04805 Display eQTL plot
From Orbitofrontal Cortex cis-eQTL Distance: -295694 Pvalue: 0.00000000121091 Beta: 1.04805 Display eQTL plot
ENSG00000225774 Orbitofrontal Cortex trans-eQTL Distance not available. 0.00000000154341 0.693943 Display eQTL plot
From Orbitofrontal Cortex trans-eQTL Distance not available. Pvalue: 0.00000000154341 Beta: 0.693943 Display eQTL plot
ENSG00000101307 Prefrontal Cortex cis-eQTL -295694 0.0000000000323851 1.11885 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -295694 Pvalue: 0.0000000000323851 Beta: 1.11885 Display eQTL plot
ENSG00000225774 Prefrontal Cortex trans-eQTL Distance not available. 0.00000000177166 0.696586 Display eQTL plot
From Prefrontal Cortex trans-eQTL Distance not available. Pvalue: 0.00000000177166 Beta: 0.696586 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000568365 Cerebellum cis-eQTL -295746 0.00000000782237 1.01655 Display eQTL plot
From Cerebellum cis-eQTL Distance: -295746 Pvalue: 0.00000000782237 Beta: 1.01655 Display eQTL plot
ENST00000381596 Cerebellum cis-eQTL -295769 0.00000000312146 1.03594 Display eQTL plot
From Cerebellum cis-eQTL Distance: -295769 Pvalue: 0.00000000312146 Beta: 1.03594 Display eQTL plot
ENST00000448467 Cerebellum trans-eQTL Distance not available. 0.00000000415413 0.68062 Display eQTL plot
From Cerebellum trans-eQTL Distance not available. Pvalue: 0.00000000415413 Beta: 0.68062 Display eQTL plot
ENST00000448467 Hippocampus trans-eQTL Distance not available. 0.0000000241048 0.655118 Display eQTL plot
From Hippocampus trans-eQTL Distance not available. Pvalue: 0.0000000241048 Beta: 0.655118 Display eQTL plot
ENST00000568365 Orbitofrontal Cortex cis-eQTL -295746 0.000000000162418 1.08517 Display eQTL plot
From Orbitofrontal Cortex cis-eQTL Distance: -295746 Pvalue: 0.000000000162418 Beta: 1.08517 Display eQTL plot
ENST00000381596 Orbitofrontal Cortex cis-eQTL -295769 0.000000000775196 1.05663 Display eQTL plot
From Orbitofrontal Cortex cis-eQTL Distance: -295769 Pvalue: 0.000000000775196 Beta: 1.05663 Display eQTL plot
ENST00000448467 Orbitofrontal Cortex trans-eQTL Distance not available. 0.00000000113972 0.697885 Display eQTL plot
From Orbitofrontal Cortex trans-eQTL Distance not available. Pvalue: 0.00000000113972 Beta: 0.697885 Display eQTL plot
ENST00000568365 Prefrontal Cortex cis-eQTL -295746 0.00000000889854 1.0137 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -295746 Pvalue: 0.00000000889854 Beta: 1.0137 Display eQTL plot
ENST00000381596 Prefrontal Cortex cis-eQTL -295769 0.000000000150676 1.09303 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -295769 Pvalue: 0.000000000150676 Beta: 1.09303 Display eQTL plot
ENST00000448467 Prefrontal Cortex trans-eQTL Distance not available. 0.000000000710219 0.708363 Display eQTL plot
From Prefrontal Cortex trans-eQTL Distance not available. Pvalue: 0.000000000710219 Beta: 0.708363 Display eQTL plot

This SNP has no significant association with any pathology marker.