Single nucleotide variant rs6711001

Genomic position: 2:

Allele info and frequencies

Click here to go to dbSNP for more information.

Associated with index/proxy SNP p-value from study LD R2 with index SNP index SNP with LD More
Schizophrenia proxy SNP 0.00000000101, for index SNP rs56145559.
 0.892028 rs56145559
proxy SNP 0.00000000101, for index SNP rs56145559.
 LD R2: 0.892028

Click here to find this SNP in GTEx database.

Gene Level

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Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000163016 Cerebellum cis-eQTL -17390 0.000000947237 1.04052 Display eQTL plot
From Cerebellum cis-eQTL Distance: -17390 Pvalue: 0.000000947237 Beta: 1.04052 Display eQTL plot
ENSG00000163016 Prefrontal Cortex cis-eQTL -17390 0.000000578319 1.05771 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -17390 Pvalue: 0.000000578319 Beta: 1.05771 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000450720 Cerebellum cis-eQTL -21226 0.000000165997 1.09547 Display eQTL plot
From Cerebellum cis-eQTL Distance: -21226 Pvalue: 0.000000165997 Beta: 1.09547 Display eQTL plot

This SNP has no significant association with any pathology marker.