Single nucleotide variant rs827374

Genomic position: 1:

Allele info and frequencies

Click here to go to dbSNP for more information.

This SNP has no significant association with diseases nor in high LD with index SNPs.

Click here to find this SNP in GTEx database.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000270231 Cerebellum cis-eQTL 632101 0.000000531517 -0.923661 Display eQTL plot
From Cerebellum cis-eQTL Distance: 632101 Pvalue: 0.000000531517 Beta: -0.923661 Display eQTL plot
ENSG00000273136 Cerebellum cis-eQTL 257730 0.000000149921 -0.957743 Display eQTL plot
From Cerebellum cis-eQTL Distance: 257730 Pvalue: 0.000000149921 Beta: -0.957743 Display eQTL plot
ENSG00000226067 Cerebellum cis-eQTL 90549 0.0000000526345 -0.984041 Display eQTL plot
From Cerebellum cis-eQTL Distance: 90549 Pvalue: 0.0000000526345 Beta: -0.984041 Display eQTL plot
ENSG00000273136 Prefrontal Cortex cis-eQTL 257730 0.000000523068 -0.926139 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 257730 Pvalue: 0.000000523068 Beta: -0.926139 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000652444 Cerebellum cis-eQTL 257730 0.000000014467 -1.01437 Display eQTL plot
From Cerebellum cis-eQTL Distance: 257730 Pvalue: 0.000000014467 Beta: -1.01437 Display eQTL plot
ENST00000621058 Cerebellum cis-eQTL 146377 0.00000000196837 -1.05716 Display eQTL plot
From Cerebellum cis-eQTL Distance: 146377 Pvalue: 0.00000000196837 Beta: -1.05716 Display eQTL plot
ENST00000652444 Prefrontal Cortex cis-eQTL 257730 0.0000000227608 -1.00577 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 257730 Pvalue: 0.0000000227608 Beta: -1.00577 Display eQTL plot

This SNP has no significant association with any pathology marker.