Variant snp_17:46056608

Genomic position: 17:

We think this SNP is not in dbSNP.

However, click here to find this position in dbSNP.

This SNP has no significant association with diseases nor in high LD with index SNPs.

We think this SNP is not in GTEx.

However, click here to browse this loci in GTEx IGV browser.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000214425 Cerebellum cis-eQTL -506273 0.0000000122743 -1.13023 Display eQTL plot
From Cerebellum cis-eQTL Distance: -506273 Pvalue: 0.0000000122743 Beta: -1.13023 Display eQTL plot
ENSG00000285668 Cerebellum cis-eQTL -468229 0.00000000189835 1.17443 Display eQTL plot
From Cerebellum cis-eQTL Distance: -468229 Pvalue: 0.00000000189835 Beta: 1.17443 Display eQTL plot
ENSG00000263503 Cerebellum cis-eQTL -454268 0.0000000344138 1.1038 Display eQTL plot
From Cerebellum cis-eQTL Distance: -454268 Pvalue: 0.0000000344138 Beta: 1.1038 Display eQTL plot
ENSG00000262539 Cerebellum cis-eQTL 202943 0.000000272263 1.04577 Display eQTL plot
From Cerebellum cis-eQTL Distance: 202943 Pvalue: 0.000000272263 Beta: 1.04577 Display eQTL plot
ENSG00000176681 Cerebellum cis-eQTL -236125 0.0000000347003 1.10358 Display eQTL plot
From Cerebellum cis-eQTL Distance: -236125 Pvalue: 0.0000000347003 Beta: 1.10358 Display eQTL plot
ENSG00000238083 Cerebellum cis-eQTL -454903 0.0000000563069 1.09062 Display eQTL plot
From Cerebellum cis-eQTL Distance: -454903 Pvalue: 0.0000000563069 Beta: 1.09062 Display eQTL plot
ENSG00000262633 Cerebellum cis-eQTL -866525 0.0000000505883 -1.09351 Display eQTL plot
From Cerebellum cis-eQTL Distance: -866525 Pvalue: 0.0000000505883 Beta: -1.09351 Display eQTL plot
ENSG00000263503 Hippocampus cis-eQTL -454268 0.000000181559 1.05771 Display eQTL plot
From Hippocampus cis-eQTL Distance: -454268 Pvalue: 0.000000181559 Beta: 1.05771 Display eQTL plot
ENSG00000262500 Hippocampus cis-eQTL -186998 0.000000123453 1.0688 Display eQTL plot
From Hippocampus cis-eQTL Distance: -186998 Pvalue: 0.000000123453 Beta: 1.0688 Display eQTL plot
ENSG00000262539 Hippocampus cis-eQTL 202943 0.0000000342074 1.10396 Display eQTL plot
From Hippocampus cis-eQTL Distance: 202943 Pvalue: 0.0000000342074 Beta: 1.10396 Display eQTL plot
ENSG00000263503 Orbitofrontal Cortex cis-eQTL -454268 0.0000000527738 1.09237 Display eQTL plot
From Orbitofrontal Cortex cis-eQTL Distance: -454268 Pvalue: 0.0000000527738 Beta: 1.09237 Display eQTL plot
ENSG00000214401 Orbitofrontal Cortex cis-eQTL -136968 0.0000000349616 1.10338 Display eQTL plot
From Orbitofrontal Cortex cis-eQTL Distance: -136968 Pvalue: 0.0000000349616 Beta: 1.10338 Display eQTL plot
ENSG00000238083 Orbitofrontal Cortex cis-eQTL -454903 0.000000000111071 1.23385 Display eQTL plot
From Orbitofrontal Cortex cis-eQTL Distance: -454903 Pvalue: 0.000000000111071 Beta: 1.23385 Display eQTL plot
ENSG00000214425 Prefrontal Cortex cis-eQTL -506273 0.000000184946 -1.05915 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -506273 Pvalue: 0.000000184946 Beta: -1.05915 Display eQTL plot
ENSG00000263503 Prefrontal Cortex cis-eQTL -454268 0.000000455264 1.03226 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -454268 Pvalue: 0.000000455264 Beta: 1.03226 Display eQTL plot
ENSG00000238083 Prefrontal Cortex cis-eQTL -454903 0.000000827562 1.01356 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -454903 Pvalue: 0.000000827562 Beta: 1.01356 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000579913 Cerebellum cis-eQTL -541452 0.00000000966507 -1.13614 Display eQTL plot
From Cerebellum cis-eQTL Distance: -541452 Pvalue: 0.00000000966507 Beta: -1.13614 Display eQTL plot
ENST00000650501 Cerebellum cis-eQTL -468229 0.000000000592053 1.19988 Display eQTL plot
From Cerebellum cis-eQTL Distance: -468229 Pvalue: 0.000000000592053 Beta: 1.19988 Display eQTL plot
ENST00000580257 Cerebellum cis-eQTL -454268 0.000000171973 1.05928 Display eQTL plot
From Cerebellum cis-eQTL Distance: -454268 Pvalue: 0.000000171973 Beta: 1.05928 Display eQTL plot
ENST00000639356 Cerebellum cis-eQTL 91517 0.0000000017687 1.17602 Display eQTL plot
From Cerebellum cis-eQTL Distance: 91517 Pvalue: 0.0000000017687 Beta: 1.17602 Display eQTL plot
ENST00000398275 Cerebellum cis-eQTL -136968 0.00000012469 1.06852 Display eQTL plot
From Cerebellum cis-eQTL Distance: -136968 Pvalue: 0.00000012469 Beta: 1.06852 Display eQTL plot
ENST00000574657 Cerebellum cis-eQTL -186998 0.000000148509 1.06352 Display eQTL plot
From Cerebellum cis-eQTL Distance: -186998 Pvalue: 0.000000148509 Beta: 1.06352 Display eQTL plot
ENST00000571422 Cerebellum cis-eQTL 202943 0.0000000731442 1.08346 Display eQTL plot
From Cerebellum cis-eQTL Distance: 202943 Pvalue: 0.0000000731442 Beta: 1.08346 Display eQTL plot
ENST00000496930 Cerebellum cis-eQTL -236125 0.0000000109069 1.13316 Display eQTL plot
From Cerebellum cis-eQTL Distance: -236125 Pvalue: 0.0000000109069 Beta: 1.13316 Display eQTL plot
ENST00000572638 Cerebellum cis-eQTL -490617 0.00000000239919 1.16913 Display eQTL plot
From Cerebellum cis-eQTL Distance: -490617 Pvalue: 0.00000000239919 Beta: 1.16913 Display eQTL plot
ENST00000571422 Hippocampus cis-eQTL 202943 0.0000000179853 1.12061 Display eQTL plot
From Hippocampus cis-eQTL Distance: 202943 Pvalue: 0.0000000179853 Beta: 1.12061 Display eQTL plot
ENST00000580257 Orbitofrontal Cortex cis-eQTL -454268 0.00000000886784 1.13826 Display eQTL plot
From Orbitofrontal Cortex cis-eQTL Distance: -454268 Pvalue: 0.00000000886784 Beta: 1.13826 Display eQTL plot
ENST00000639356 Orbitofrontal Cortex cis-eQTL 91517 0.0000000148451 1.12547 Display eQTL plot
From Orbitofrontal Cortex cis-eQTL Distance: 91517 Pvalue: 0.0000000148451 Beta: 1.12547 Display eQTL plot
ENST00000333412 Orbitofrontal Cortex cis-eQTL -456102 0.000000000271394 1.21607 Display eQTL plot
From Orbitofrontal Cortex cis-eQTL Distance: -456102 Pvalue: 0.000000000271394 Beta: 1.21607 Display eQTL plot
ENST00000572638 Orbitofrontal Cortex cis-eQTL -490617 0.0000000002755 1.21577 Display eQTL plot
From Orbitofrontal Cortex cis-eQTL Distance: -490617 Pvalue: 0.0000000002755 Beta: 1.21577 Display eQTL plot
ENST00000579913 Prefrontal Cortex cis-eQTL -541452 0.00000000419232 -1.15781 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -541452 Pvalue: 0.00000000419232 Beta: -1.15781 Display eQTL plot
ENST00000581296 Prefrontal Cortex cis-eQTL -506273 0.0000000104206 -1.13599 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -506273 Pvalue: 0.0000000104206 Beta: -1.13599 Display eQTL plot
ENST00000650501 Prefrontal Cortex cis-eQTL -468229 0.000000000519168 1.20399 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -468229 Pvalue: 0.000000000519168 Beta: 1.20399 Display eQTL plot
ENST00000580257 Prefrontal Cortex cis-eQTL -454268 0.0000000709268 1.0862 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -454268 Pvalue: 0.0000000709268 Beta: 1.0862 Display eQTL plot
ENST00000583740 Prefrontal Cortex cis-eQTL 426003 0.000000000138576 1.23069 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 426003 Pvalue: 0.000000000138576 Beta: 1.23069 Display eQTL plot
ENST00000639356 Prefrontal Cortex cis-eQTL 91517 0.000000000988646 1.19029 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 91517 Pvalue: 0.000000000988646 Beta: 1.19029 Display eQTL plot
ENST00000398275 Prefrontal Cortex cis-eQTL -136968 0.0000000299577 1.10925 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -136968 Pvalue: 0.0000000299577 Beta: 1.10925 Display eQTL plot
ENST00000571422 Prefrontal Cortex cis-eQTL 202943 0.000000111103 1.07373 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: 202943 Pvalue: 0.000000111103 Beta: 1.07373 Display eQTL plot
ENST00000572638 Prefrontal Cortex cis-eQTL -490617 0.000000000584987 1.20149 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -490617 Pvalue: 0.000000000584987 Beta: 1.20149 Display eQTL plot

This SNP has no significant association with any pathology marker.