Variant snp_22:18423586

Genomic position: 22:

We think this SNP is not in dbSNP.

However, click here to find this position in dbSNP.

This SNP has no significant association with diseases nor in high LD with index SNPs.

We think this SNP is not in GTEx.

However, click here to browse this loci in GTEx IGV browser.

Gene Level

Click gene id to go to that gene. Cilck table header to sort by that attribute.

Gene ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENSG00000278558 Cerebellum cis-eQTL -104216 0.000000103929 1.20304 Display eQTL plot
From Cerebellum cis-eQTL Distance: -104216 Pvalue: 0.000000103929 Beta: 1.20304 Display eQTL plot
ENSG00000274602 Cerebellum cis-eQTL 110060 0.000000400026 1.15878 Display eQTL plot
From Cerebellum cis-eQTL Distance: 110060 Pvalue: 0.000000400026 Beta: 1.15878 Display eQTL plot
ENSG00000278558 Prefrontal Cortex cis-eQTL -104216 0.000000100259 1.21717 Display eQTL plot
From Prefrontal Cortex cis-eQTL Distance: -104216 Pvalue: 0.000000100259 Beta: 1.21717 Display eQTL plot

Transcript Level

Click on transcript id to go to that transcript. Cilck table header to sort by that attribute.

Transcript ID Discovered on cis/trans Distance p-value Regression coefficient eQTL plot More
ENST00000614395 Cerebellum cis-eQTL -104216 0.0000000741938 1.21357 Display eQTL plot
From Cerebellum cis-eQTL Distance: -104216 Pvalue: 0.0000000741938 Beta: 1.21357 Display eQTL plot
ENST00000610959 Cerebellum cis-eQTL 110060 0.0000000182004 1.2553 Display eQTL plot
From Cerebellum cis-eQTL Distance: 110060 Pvalue: 0.0000000182004 Beta: 1.2553 Display eQTL plot
ENST00000612500 Cerebellum cis-eQTL 114437 0.000000220169 1.17883 Display eQTL plot
From Cerebellum cis-eQTL Distance: 114437 Pvalue: 0.000000220169 Beta: 1.17883 Display eQTL plot
ENST00000611748 Cerebellum cis-eQTL 114470 0.0000000691044 1.21576 Display eQTL plot
From Cerebellum cis-eQTL Distance: 114470 Pvalue: 0.0000000691044 Beta: 1.21576 Display eQTL plot
ENST00000616531 Cerebellum cis-eQTL 124425 0.00000000108807 1.32978 Display eQTL plot
From Cerebellum cis-eQTL Distance: 124425 Pvalue: 0.00000000108807 Beta: 1.32978 Display eQTL plot
ENST00000480319 Cerebellum trans-eQTL 3053794 0.00000000444494 0.679683 Display eQTL plot
From Cerebellum trans-eQTL 3053794 Pvalue: 0.00000000444494 Beta: 0.679683 Display eQTL plot

This SNP has no significant association with any pathology marker.